LOCUS       NM_001107555            2778 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus IKAROS family zinc finger 5 (Ikzf5), mRNA.
ACCESSION   NM_001107555 XM_001053740 XM_219325
VERSION     NM_001107555.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Westman,B.J., Perdomo,J., Matthews,J.M., Crossley,M. and
            Mackay,J.P.
  TITLE     Structural studies on a protein-binding zinc-finger domain of Eos
            reveal both similarities and differences to classical zinc fingers
  JOURNAL   Biochemistry 43 (42), 13318-13327 (2004)
   PUBMED   15491138
REFERENCE   2  (bases 1 to 2778)
  AUTHORS   Perdomo,J., Holmes,M., Chong,B. and Crossley,M.
  TITLE     Eos and pegasus, two members of the Ikaros family of proteins with
            distinct DNA binding activities
  JOURNAL   J Biol Chem 275 (49), 38347-38354 (2000)
   PUBMED   10978333
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_219325.4, XM_001053740.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132261, SAMD00132262
                              [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q41"
     gene            1..2778
                     /gene="Ikzf5"
                     /gene_synonym="Zfpn1a5"
                     /note="IKAROS family zinc finger 5"
                     /db_xref="GeneID:309031"
                     /db_xref="RGD:1310965"
     exon            1..127
                     /gene="Ikzf5"
                     /gene_synonym="Zfpn1a5"
                     /inference="alignment:Splign:2.1.0"
     exon            128..271
                     /gene="Ikzf5"
                     /gene_synonym="Zfpn1a5"
                     /inference="alignment:Splign:2.1.0"
     exon            272..451
                     /gene="Ikzf5"
                     /gene_synonym="Zfpn1a5"
                     /inference="alignment:Splign:2.1.0"
     CDS             319..1578
                     /gene="Ikzf5"
                     /gene_synonym="Zfpn1a5"
                     /note="zinc finger protein, subfamily 1A, 5"
                     /codon_start=1
                     /product="zinc finger protein Pegasus"
                     /protein_id="NP_001101025.1"
                     /db_xref="GeneID:309031"
                     /db_xref="RGD:1310965"
                     /translation="MGEKKPEPLDFVKDFQEYLTQQTHHVNMISGSVSGDKEAETLQG
                     AGTDGDQNGLDHPSVEVSLDENSGMLVDGFERTFDGKLKCRYCNYASKGTARLIEHIR
                     IHTGEKPHRCHLCPFASAYERHLEAHMRSHTGEKPYKCELCSFRCSDRSNLSHHRRRK
                     HKMVPIKGTRSSLSSKKMWGVLQKKTSNLGYSRRALINLSPPSMVVQKPDYLNDFTHE
                     IPNIQTDSYETMAKTTPTGGLPRDPQELMVDNPLNQLSTLAGQLSSLPPENQNPASPD
                     VDPCPDEKPFMIQQPSAQAVVSAVSASIPQSSSPTSPDPRPSHSQRNYSPVAGPSSEP
                     SAHTSTPSIGNSQPSTPAPTLPVQDPQLLHHCQHCDMYFADNILYTIHMGCHGYENPF
                     QCNICGCKCKNKYDFACHFARGQHNQH"
     exon            452..634
                     /gene="Ikzf5"
                     /gene_synonym="Zfpn1a5"
                     /inference="alignment:Splign:2.1.0"
     exon            635..2778
                     /gene="Ikzf5"
                     /gene_synonym="Zfpn1a5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtggggcggg cgggaaggga gcggagacac aacaaatatg gcggctacag ctgcgacgct
       61 gacgaacgct gaggcggtgg cggcgacgaa caaggctgtg gggattcctc ggtgcagttg
      121 tcaggagact tcttgtggca tttgaatttt agttgaaatt tcctccatgg ccttttggag
      181 tcctgtggtg tctccagagt aaagttaaag ttcagttatt taacatttca gcaatgttgc
      241 ggtggaaaga aaacagtaga actaatttgg gatataacag actttcaact taaagagaga
      301 aagaaagaaa gcaccaagat gggtgaaaag aagccagagc ctttggactt cgtcaaagat
      361 ttccaggaat acctgacaca gcagacgcat catgtgaaca tgatttcggg atcagttagt
      421 ggggacaaag aagcagagac tcttcaggga gctggaacag atggcgatca aaacggactt
      481 gatcacccat ctgttgaagt ttccctggat gaaaactcag gaatgttagt agacgggttt
      541 gaaaggacct tcgatgggaa gctcaagtgc cggtactgca actatgccag taaagggacg
      601 gcccggctca tcgagcacat caggatccac acaggcgaga agcctcatcg atgtcactta
      661 tgtccgtttg catctgctta tgagcgccat ctggaagccc acatgcgctc tcacactggg
      721 gaaaaaccat acaaatgtga attgtgttcc ttccgctgca gtgaccgaag caacctgtcc
      781 caccatcgaa ggcgcaaaca taaaatggta ccaattaaag gtaccaggtc ttccttaagc
      841 agcaagaaaa tgtggggagt tttacaaaag aaaacaagca atcttgggta tagcagaaga
      901 gcactaatca acttaagtcc gccttccatg gtggtccaga aaccagacta ccttaacgat
      961 tttacccatg aaattccaaa tattcagacc gactcctacg aaaccatggc aaaaaccaca
     1021 ccaactggtg gcctgccaag ggacccccaa gaactcatgg ttgacaaccc tttgaatcag
     1081 ctctctactt tagcaggaca gttgtccagc ttgccaccag aaaaccaaaa ccctgcctcc
     1141 cctgatgtag atccctgccc tgatgaaaag cctttcatga tccagcagcc ctctgcccaa
     1201 gcagtagtct ctgctgtgtc agcaagtatt cctcagagct cctcccccac aagtccagac
     1261 cctcggccgt cgcacagcca gaggaactac agtccagtgg cagggcccag cagtgaacca
     1321 agtgcccaca ccagtacccc cagcatagga aacagccagc caagcactcc agctccaacc
     1381 ctgccggtcc aggatcctca gcttctgcac cactgccagc actgtgatat gtactttgca
     1441 gacaatatcc tttacactat tcacatggga tgccatgggt atgagaaccc ctttcagtgt
     1501 aatatatgtg gatgcaaatg taaaaacaag tatgattttg cctgtcattt tgcaagaggg
     1561 cagcataacc agcactgaac acagtcagca ttgatctcac ttggtttggc ctttggggag
     1621 tttgtagttt ggtctttagt ttgatcatcc ctaataaggt atatgctaat ttaaaattta
     1681 tacattttat tcataaaata gaagtttgat agtgagaaaa ggttttgtta acttttcata
     1741 aaagtctgtt cagggttatt tatgcattag atagttaggt gcattgttgt cttttccttt
     1801 agccttctga gacttcctac acttgtcctg aggactccag ggtaatcctg actcttgatg
     1861 ctttagtgtg tacattacag cgaaacattc ttcctgccat agttcaaaat ggcacaataa
     1921 acttctcatg caatcttttg taacatttca gtgtttatag acaaactgcc tttaagtttg
     1981 cttttaattc acataactta acttgagtta gttttattac aaccaaaacc agtagttatt
     2041 tcagtgtaat aaatctcttc aagggcaagt ataaaacaat tcttttcaaa tttaaattat
     2101 aaaaatgcaa gtcttggaac ttgaaatttg ggctaagttg aaaattgtgt tcagtatttg
     2161 agatatctgt tcattttctg tgtaaacatg tttgtgtttc atttatatat atttatgtat
     2221 tttgagtatt cttttaaagc cacaggtaaa tatattagag tgctagatgc ctttttcgat
     2281 ctgaatcctt cattcaaatt ctgcactcac tggtgtcagg taagattgac agccacactg
     2341 attactttat tcttcctagt cttcgatgac caaagaggaa ggagaacgca tccatcttag
     2401 taagatgctt caaaacagtc tccaaggttt ccttgtctgc cttctgtaca tttatcgccc
     2461 ttaatttcca agaaggggcg atgtagagac ccagaaaaat gtactagtga agaaacagta
     2521 cagtaatgag agcatgccca gagcagagca ggccatagaa gtccccctgt gagtcttcat
     2581 ggacagagac ggtgggataa tcaccaccgt gggaaaggat aaagagtgaa agttattatg
     2641 aagcacattg aaatgtgaca tttaatttac ctataattag agtggttcat tttatatagg
     2701 aagccactat ttttgtatcg tgtaataagt agcttacttt gaagagagcc tggcaaaaca
     2761 ataaaacatt gtcagtta
//
