LOCUS       XM_001055346            4999 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interactor of HORMAD1 1 (Iho1), mRNA.
ACCESSION   XM_001055346
VERSION     XM_001055346.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001055346.8.
            
            On Jan 21, 2021 this sequence version replaced XM_001055346.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4999
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4999
                     /gene="Iho1"
                     /note="interactor of HORMAD1 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     2 long SRA reads, 2 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:680018"
                     /db_xref="RGD:1596869"
     CDS             1651..3375
                     /gene="Iho1"
                     /codon_start=1
                     /product="interactor of HORMAD1 protein 1"
                     /protein_id="XP_001055346.3"
                     /db_xref="GeneID:680018"
                     /db_xref="RGD:1596869"
                     /translation="MNFNVWNVKEMLSIPSGSGLTKPSNWNSNQTDCSSLSDSQFLFG
                     SQFCPENSETLLPPLDAGTYLRYPKQTQQNSVDNEPSIFTKYQAKPQLFGGDTKGEGL
                     FSLPLPVGKPKGLSKQFEEKKRRATDQSDSETLHNFVSHFPEVIHKLQTAVEKSEEHL
                     SSRSQSILDSVETIAKTFQETARVQHDLMVEAVKDKGSVEQAVLEIQRACAARQAEFM
                     EMKSTLKNLEVLVVQQSKDFQQFCDNLGQLIVPSVLGELKKFTSVPQVVGHLKDSASQ
                     TSPSLTQSHHYPRQEPYPSEEPATWQGQEPPAGNSSRGSQRPTEFGVWDEGAESDVFQ
                     KATLPTDRPHRGSEHVKGKAVQTYCKNWVMTSRSLSNHFSVPDQKAGSEQDLTAPGAS
                     QLDCESEARVEGICPTYEAQSKCALDSFEQSAAEQKRGRTCRKRRRGKKPQPRRAKRG
                     RLLARVQKQTSGEACAITAERPCPQSSVCSSQGPLICWPPLRSSTKSACHILGGRGET
                     SMTAGAVQGSLLKSSQHSSTDSSSQEDQQINWFSDISLENLEPPLCKKGGKNLLSDPD
                     FDSSDDNF"
ORIGIN      
        1 gggaccgaac ccagggcctt gcgcttccta ggtaagcact ctaccactga gctaaatccc
       61 cagcccctgt atgctgcttt attatatgct acagtcagtg tatataaaat agttaaacct
      121 tgtgaaacag aaatcaatga aaattcagag aggtagatgt taaggacgga caagtagaag
      181 attgtgtatt acagcacgtg ttaaagagaa gcttctgata atgtgctgtg aaagatgaag
      241 actttgagta tgttctgtgt gtggcataaa atcatcgtga attggaattg agcattgtga
      301 gcatttggtc gttatgagag gtcttaagga aacttgccaa gtttgaagct ggagcatcac
      361 tggaataagt tcaaagaaaa acaatatgta gctcttcatt tgtatacgtg aacacagtgt
      421 gactcagagt ttgggtacgt gaacactgta cggttcttca gcgtttgagt acatttgtaa
      481 gaattggaat gtctgcgtac tctactcctc gaccaataaa atctcagttg tgaaaaaaaa
      541 aagaaaaaga gaagcttctg tacagacttc gaacttagtt ctcttgaata ttcactggtt
      601 catgaaaggt ggtttgagaa acctcacgat gtatgactac aaaaaggagc agactttctg
      661 gggtctgaag agatttgtac ttgaagacac tccagtcagc cgagagggtc atgttgagca
      721 ttctgcagac agaactgttt caagtgtgca gctgcctggg aaaccttcat gccattgagc
      781 ctggcctcca gtcggagctg ctgaaccacc ttcttcatgg agctcgggtc agccgggcac
      841 gttaagattg ttaaaccgtt aaaaaaaaaa aaaacaaaaa aaaaccctct ggcctcggag
      901 aagcgcgagg gcgccgagcg gctcctcaag ttgcagaacg cgggcctgtg tacttttgca
      961 ggatgtgcag aagccatctc aagatgagat gggtaaaacc ctggagacca tggaagcctc
     1021 cttggccctg gagaacctga accaggccct cttggatcag cgtgccctgg gttctgccca
     1081 cacagaccct tatctctgtg cctcttggaa aaccacttcc tggataagga tgtgaagctc
     1141 atcaagaaga tgggcaacca cctgaacaac ctccgtgggg tggcagggcc acaaccagca
     1201 cgtggcctag gcatctctgg gcgagtatct ctttgagcgc ctccctctca agcaggacta
     1261 ggcctctgtg ccttccaagg ggctcccttc tctgctctgc agcagccgcc tcagcacctc
     1321 cacctgaatg aacctctaaa gccactaggc agccctggag cctctcccaa gtcttggacc
     1381 gagtaaaaat aaagtttttg aaacagaaaa acaaaacaaa acaaacaaac aaacaaacaa
     1441 cccaaaaaac caaaccaaac taaacccaaa aaacccacaa aacatcctct ggcctcaagc
     1501 atcgggaggc ggagtcaagg atcggcgttc tcattggtga gcgcagccgg gggcggggcc
     1561 tcacctcggc gggctttcgc aggcgcccag gaagtcgctg gaaggtgtgc gtgtggtgcc
     1621 gcgtgtggtt gctgtggaga cacattaaaa atgaatttta atgtctggaa tgtcaaagag
     1681 atgctcagca tcccctcagg ctctgggctc actaaaccgt ctaactggaa tagtaatcag
     1741 actgactgtt cttctctcag tgattcccag ttcctctttg gatctcagtt ctgtcctgaa
     1801 aattcagaaa ctctgttacc acccttggat gctggcactt acttaagata cccaaaacag
     1861 acacaacaga attctgtaga taatgaacct agtattttca caaaatacca ggcgaagccc
     1921 cagttgtttg gaggcgatac aaaaggtgaa ggcttatttt ctcttccttt gccagttggg
     1981 aaaccaaaag gactctcaaa acagtttgag gagaaaaaac gaagggcaac cgaccaatct
     2041 gacagtgaga cgctgcacaa cttcgtttct cattttccag aagtcatcca caagttgcag
     2101 acagctgtgg aaaagtctga ggaacatctc agctctagaa gccagtctat tttagactct
     2161 gtggagacca tagccaagac ctttcaagag actgcgaggg ttcagcatga cctgatggtt
     2221 gaggcagtga aagacaaagg cagcgtggag caggccgtcc ttgagataca gagggcatgt
     2281 gcagctagac aagcagaatt tatggagatg aaatccaccc tgaagaacct tgaagtttta
     2341 gttgtccagc agagtaagga cttccagcag ttttgtgata atctgggcca gctcattgtg
     2401 cctagtgtcc taggagagct gaaaaaattc acctctgttc ctcaggtggt tgggcatctg
     2461 aaagacagcg cctctcagac ctcaccatct ctgacccaga gccatcatta tcccaggcag
     2521 gaaccgtatc cctctgagga gccagctact tggcagggcc aggagcctcc tgcagggaat
     2581 tccagtaggg gttcccagag gcctacagag ttcggtgtct gggatgaagg agcagagagt
     2641 gatgtttttc aaaaggctac attgccaaca gacaggcccc acagaggcag tgagcatgtg
     2701 aagggcaagg ccgtgcagac gtactgtaag aactgggtta tgacctccag aagcctcagt
     2761 aaccacttct ctgtcccaga ccagaaggcc ggcagcgagc aggatctgac tgccccaggc
     2821 gcctcacagc tggactgtga gtctgaagcc agagtggagg gcatctgccc cacatacgag
     2881 gcccaaagca agtgcgccct tgactcattt gaacagtcag cagctgaaca gaagagaggc
     2941 aggacctgca gaaaaaggag gagaggcaag aagccgcagc cgaggcgagc aaagagaggc
     3001 aggcttctag ctagggtaca aaagcagacc tcaggggagg cctgtgccat cacggccgag
     3061 cgtccctgtc cccagtcttc agtttgtagc tcacaggggc ccctcatctg ttggccgcct
     3121 ctgaggagct ccaccaagtc agcttgtcat attttaggag gaagaggaga gaccagtatg
     3181 acagcagggg cagtgcaggg gagcctcctg aagtcttccc agcactcctc cacagacagc
     3241 agttcccagg aggaccagca gataaattgg ttcagtgaca tcagccttga aaacctagag
     3301 cctcctctgt gtaagaaggg agggaagaat ttgctctctg acccggattt tgatagcagt
     3361 gatgataatt tctaacctgc caacagtgac gttagctgat ggtttgttat ctcagaacca
     3421 caatgtagga cattggattg ggcagcacct gaagttggcc tatccagcct cagaccagag
     3481 gccttgactg gccagtggga ggcagggaga agcagcactc agttatcagt tgctgctcac
     3541 tagaagggaa gttatagaga agaaatgtgt ggagacagtg aagagaattc ggggagtagc
     3601 ctgaggtaaa gcatcagaaa ggtagctgtg tacacttgga gaaaagggaa tcggcttcct
     3661 tatggaatac tatttggaag aactctcata aaacatttgt gactacatga gtagctctca
     3721 agacgtgccc tgtacctctg atacccttct gagcctcagc tttatctagt gctgtcacag
     3781 agttttgtct tttcagtgag aggacatgtt acagggaaca ctattagatg ggtttattat
     3841 gaatttgcat tctcctacct cagccttcag aatgttggca ctataaacat gtctcgattc
     3901 tcaactgtaa agcagactac ttcagaacag agtggtaatc ctggtgctgg tctgcatgtc
     3961 tttaatccca gcactgggga ggtagaggca ggtctctgag tccacagagc aacccaaaac
     4021 cacagcaaca acaacaaaaa ccccaaacaa acagaacaga gcgttaaagc tgcctatggg
     4081 agtggggtgt ggtggctcat gcctgagcag caagaaaggt tcctcccagc ccttcccaga
     4141 ctgacttcag gcacttacag ggccatcaga aggaagcttt gagaccaaag gcccttattc
     4201 ctgttgaaca attgtagtat tggttatatt ttatttcttt tttttttttt ttttttggtt
     4261 cttttttttt cagagctggg gaccgaaccc agggccttgc gcttcctagg taagcgctct
     4321 accactgagc taaatcccca gccccttatt tctatgtctt gttgatattt actgttctat
     4381 tttaatccaa accctgtgaa tttaagtatt tttcaggtag tgtttgtgaa tgagcccttc
     4441 tagagccatc tgattgttaa gtgccaaaga tggaccctgt gacgctaggc tctgctgttg
     4501 taacacgctg tttctgcaaa agtatttcat tgtgtgtaat gacatcagag tccatgtgac
     4561 tccgtggtaa catctctaac acgactgaga taattaaaaa ttacactcta tgtctctggc
     4621 agtcattggg aaagggtatc gtttcccgtt ttattccctt tatggctctt tactgtcttt
     4681 ttttatcctc tcttttttaa tgttcctgcc agacttggtg agcgtgacac aggcccaaac
     4741 acgtccctgg aacacacagc atttttggct cttagatgct cccagagctg tatgtggcta
     4801 cacaggggcg gatgtggtgg gagggtagag tctgctgagc gctccgccct ccgttactcc
     4861 aggatggaaa tgaggttgac tacagcactt aattgcctga cagtcctgta cccatttaca
     4921 tattacccca agatggcctt ttgagtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     4981 gtgtgtgtgt gtgtgtgtt
//
