LOCUS       NM_133542               2252 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus immunoglobulin superfamily, member 6 (Igsf6),
            mRNA.
ACCESSION   NM_133542
VERSION     NM_133542.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Bates,E.E., Dieu,M.C., Ravel,O., Zurawski,S.M., Patel,S.,
            Bridon,J.M., Ait-Yahia,S., Vega,F. Jr., Banchereau,J. and
            Lebecque,S.
  TITLE     CD40L activation of dendritic cells down-regulates DORA, a novel
            member of the immunoglobulin superfamily
  JOURNAL   Mol Immunol 35 (9), 513-524 (1998)
   PUBMED   9809579
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Dec 1, 2020 this sequence version replaced NM_133542.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ223184.1, SRR26643285.3620.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN12840119,
                                           SAMN16676785 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-112               JAXUCZ010000001.1  185051845-185051956 c
            113-472             JAXUCZ010000001.1  185047956-185048315 c
            473-576             JAXUCZ010000001.1  185045693-185045796 c
            577-627             JAXUCZ010000001.1  185045075-185045125 c
            628-705             JAXUCZ010000001.1  185044695-185044772 c
            706-2252            JAXUCZ010000001.1  185041462-185043008 c
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q36"
     gene            1..2252
                     /gene="Igsf6"
                     /gene_synonym="DORA"
                     /note="immunoglobulin superfamily, member 6"
                     /db_xref="GeneID:171064"
                     /db_xref="RGD:620663"
     exon            1..112
                     /gene="Igsf6"
                     /gene_synonym="DORA"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..762
                     /gene="Igsf6"
                     /gene_synonym="DORA"
                     /function="cell surface receptor"
                     /codon_start=1
                     /product="immunoglobulin superfamily member 6 precursor"
                     /protein_id="NP_598226.2"
                     /db_xref="GeneID:171064"
                     /db_xref="RGD:620663"
                     /translation="MGPVSTSRRGLRLGISLILLQVGVVGACTVSVLQPGYLEVDYTS
                     QTVTMECTFSTTGCPAVQPKSLWFRCGTHQPEALCLDGCRNEADKFTVKETLDQNRVS
                     LTVNRLSPNDSAIYICGIAFPNEKVPTAKQTGDGTTLVVRERLFSREVHSLLIVLLAL
                     LAVYVTGVCVIFIVLFRSKSNTPRSRETKEDSKKKSARRIFQEIAQELYHKRYVETSH
                     QPEQDGNYENRKALPSPGRP"
     exon            113..472
                     /gene="Igsf6"
                     /gene_synonym="DORA"
                     /inference="alignment:Splign:2.1.0"
     exon            473..576
                     /gene="Igsf6"
                     /gene_synonym="DORA"
                     /inference="alignment:Splign:2.1.0"
     exon            577..627
                     /gene="Igsf6"
                     /gene_synonym="DORA"
                     /inference="alignment:Splign:2.1.0"
     exon            628..705
                     /gene="Igsf6"
                     /gene_synonym="DORA"
                     /inference="alignment:Splign:2.1.0"
     exon            706..2252
                     /gene="Igsf6"
                     /gene_synonym="DORA"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctttctgaag agagaaaagt ggaaaaggcg gcacatgcac cagcgatggg ccctgtgagc
       61 acgagcagga ggggcctccg gctaggaatc agcctgatcc ttcttcaagt tggtgtggtg
      121 ggcgcctgta ctgtatctgt gctacagcca ggttacctag aggtggacta cacgtctcag
      181 actgtcacca tggagtgtac cttttctaca actggatgcc ctgcagtgca accaaaaagc
      241 ttgtggtttc gctgtggcac tcaccagcct gaagctctgt gcttggacgg atgcagaaat
      301 gaggcagaca agttcacagt gaaagaaacc ctggaccaga accgagtctc cctcactgtt
      361 aacaggctgt ctccaaatga cagtgcaatc tacatctgtg gaatagcatt tcccaatgaa
      421 aaggtaccaa cagccaaaca gactggagac gggactacac tggtggtaag agaaagactt
      481 ttcagcaggg aggtgcacag tctcctgata gtgctcttag cactgctcgc agtctacgtc
      541 accggtgtgt gtgtgatctt catagtcctc ttcagatcaa aatctaacac tccaagaagc
      601 agagaaacca aggaagactc gaaaaagaag agtgctcgac gtatcttcca ggaaattgct
      661 caagaattat accataagag atatgtggaa acaagtcatc agcctgagca agacggcaat
      721 tatgaaaaca gaaaagcact ccccagccct ggaagaccat agatgtgctg actttttact
      781 taaaccattg acagtgcaac tccagaatct atggcagtgt gaatggacat acagcaatcc
      841 aaacaacagc aaagagagct gaggtgtagc ttgagtggca aagtgcttgc ccagtaggca
      901 tgaagtctta gctttgatcc tcagcaccac ataactcagc aaagtgacac aagcctgtat
      961 tcccaacatt gtgtagtagt ataaaaagtc agaagttcaa ggtcatccct gactatagga
     1021 tgaacctgaa gtcagagaca tgttatcttg tctcaaaaac actgccacca ccaagagaaa
     1081 agggcaggac aagtgggaaa acagccagtc acgccagaag gcagagcgga agtaactgtc
     1141 acgaaccata atgatggaat gtgaaaacct caagaaaact caactggagg accttttttc
     1201 taattttcca ggaacagtct aaggagcctc attttaaaga aaaacttcac cttcagcttt
     1261 taaaaactgt tatcatgtgc atcttgtcag tctacccaac atactagatg tgtgatggcc
     1321 attaactgga agaaagcttc aagtcaaacc acaggtctca attctgaggg gaaaaaatac
     1381 tttcctgagt tgtagaaatg atgaaacaat tagaatcaag tgagaagggc aaaaggagtg
     1441 aggagaagat caatttttag gtaaaagaaa ctcattgcaa acaatatctt ggaacaaaaa
     1501 tgacttcttc agatactgta atggagcagt gggcagtgaa cattctccag ctgaggtata
     1561 caaaacaact taggctgtac cagcaacaaa acaatactga aagactagag gaagactcta
     1621 aacagaggaa gcccaaagcc tgtgagaaaa tgcctcagga atgcagacaa ctgactctag
     1681 atgtcagtgt ggtgccaaag aactgcagac ctagtgagct tgaaaggagg gcctgataca
     1741 gaaggtcctc actatctcac tgaggtgacc taagccaggt atggtggcac ctacctgcct
     1801 ttaatcctaa cactgaggca gagggaggtg gatctcttag ttcaggccta agatctaaga
     1861 tcaagttcca ggacagccaa ggctgttaaa cagaaaaaca ttgtctgaaa aaaaacagtg
     1921 gtgggggagg gggaattgtt ctttgaatgt aagtaccaac gagcacactg ctcaccaact
     1981 cgatcacagt gtatgacctc agtcaggcgc ttctaaacag taataaacgt aaatggtacg
     2041 cactcttcaa atacagtctt cacacacttc aaagtctctt tggaagagtc tgaaacttgt
     2101 ggctcaaatc ctgatatgtg tcccaaaaac tggagaggaa gaagtggata acctcatctt
     2161 atttccatgc acatgcacac acgtgcacat gcatgcacac aagtacattt gcaatttaca
     2221 tacacaaaag gaataaaatt ggcatacaca gc
//
