LOCUS       NM_001106455            6565 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus immunoglobulin superfamily, member 3 (Igsf3),
            mRNA.
ACCESSION   NM_001106455 XM_227520
VERSION     NM_001106455.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 6565)
  AUTHORS   Foster,J. 2nd, Kapoor,S., Diaz-Horta,O., Singh,A., Abad,C.,
            Rastogi,A., Moharana,R., Tekeli,O., Walz,K. and Tekin,M.
  TITLE     Identification of an IGSF3 mutation in a family with congenital
            nasolacrimal duct obstruction
  JOURNAL   Clin Genet 86 (6), 589-591 (2014)
   PUBMED   24372406
REFERENCE   2  (bases 1 to 6565)
  AUTHORS   Teckchandani,A., Toida,N., Goodchild,J., Henderson,C., Watts,J.,
            Wollscheid,B. and Cooper,J.A.
  TITLE     Quantitative proteomics identifies a Dab2/integrin module
            regulating cell migration
  JOURNAL   J Cell Biol 186 (1), 99-111 (2009)
   PUBMED   19581412
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001106455.1.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-43                JAXUCZ010000002.1  191501410-191501452
            44-454              JAXUCZ010000002.1  191552792-191553202
            455-844             JAXUCZ010000002.1  191556375-191556764
            845-1246            JAXUCZ010000002.1  191560444-191560845
            1247-1651           JAXUCZ010000002.1  191564750-191565154
            1652-2062           JAXUCZ010000002.1  191576974-191577384
            2063-2470           JAXUCZ010000002.1  191579335-191579742
            2471-2944           JAXUCZ010000002.1  191582456-191582929
            2945-6565           JAXUCZ010000002.1  191584629-191588249
FEATURES             Location/Qualifiers
     source          1..6565
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..6565
                     /gene="Igsf3"
                     /note="immunoglobulin superfamily, member 3"
                     /db_xref="GeneID:295325"
                     /db_xref="RGD:1307796"
     CDS             1..3195
                     /gene="Igsf3"
                     /codon_start=1
                     /product="immunoglobulin superfamily member 3 precursor"
                     /protein_id="NP_001099925.1"
                     /db_xref="GeneID:295325"
                     /db_xref="RGD:1307796"
                     /translation="MKCFFPVLSCLAVLVIPDSLQTTAVPQTLHKVEQDPLELSCEVA
                     TETLQHTHLSVSWLRQKGGENPVEVISLSRDFILHSSSEYAQRQSLGEVRLDKLGRST
                     FRLTIFHLQPSDQGEFYCEAAEWIQDPDGSWYAMTRKRSEGAVVNVQPTDKEFTVRLE
                     TDKRLHTVGEPVEFRCILEAQNIPDRYFAVSWAFNSSLIATMGPNAVPVLNSEFAHRE
                     AKGQLKVAKEGDGVFVLKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPI
                     VVLPLKSSMSVEVASNASVVLEGEDLHFSCTVRTVGRLQARFSVIWQLVDRQNRRSNV
                     MWLDRDGTVQPGSSYWERSSYGGIQMEQVQPNSFSLGIFSSRKEDEGQYECHVTEWVR
                     AVDGEWQIVGERRASTLVSITALETGFAVTAISRTPGVTYSDSFDLQCIIKPHYPARV
                     PVSVTWRFQPVGTVEFHDLVTFTRDGGVQWGDKSSTFRTRTAIEKAESSNNVRLSISR
                     ASDTEAGKYQCVAELWRRNYNNTWTRLAERTSNLLEIRVLQPVTKLQVSKSKRTLTLV
                     ENRPIQLNCSVKSQTSPNSHFAVLWYVHKPSDADGKLILKTTHNSAFEYGTYAEEEGL
                     RGRLQFERHVSGGLFSLTVQRAEVSDSGSYYCHVEEWLLSPNYAWYKLAEEVSGRTEV
                     TVKQPDSRLKLSQAQGSLSILETRQIQLECVVLNRTSMASQLVVEWFVWKPNHPEREV
                     VAHLSRDATFHYGEQAAKNNLKGRLHVESPSSGVYRLFIQNVAVQDSGTYSCRVEEWL
                     LSPSGVWYKRAEDTAGQTAVTVMRPDAALQVDTVVPNATVTEKATFQLDCSILSRSSQ
                     DSRFAVAWYSLRTKGGGKRGSLGIDEQEEEEVSEEEASEDPTERTVLLSVGPDAVFGP
                     EGSPWEGRLRFQRLSPLLYRLTVLEASPQDTGNYSCHVEEWLPSPQKGWYRLTEEESA
                     PIGIRVLDTSSTLQSLICSNDALFYFVFFYPFPIFGILIITILLVRFKSRNSSKNSEG
                     KNGVPLLWIKEPHLNYSPTCLEPPVLSIHPGAID"
     exon            1..43
                     /gene="Igsf3"
                     /inference="alignment:Splign:2.1.0"
     exon            44..454
                     /gene="Igsf3"
                     /inference="alignment:Splign:2.1.0"
     exon            455..844
                     /gene="Igsf3"
                     /inference="alignment:Splign:2.1.0"
     exon            845..1246
                     /gene="Igsf3"
                     /inference="alignment:Splign:2.1.0"
     exon            1247..1651
                     /gene="Igsf3"
                     /inference="alignment:Splign:2.1.0"
     exon            1652..2062
                     /gene="Igsf3"
                     /inference="alignment:Splign:2.1.0"
     exon            2063..2470
                     /gene="Igsf3"
                     /inference="alignment:Splign:2.1.0"
     exon            2471..2944
                     /gene="Igsf3"
                     /inference="alignment:Splign:2.1.0"
     exon            2945..6565
                     /gene="Igsf3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagtgct ttttcccagt gttgagctgt ctggctgtgc tggtgatccc agattccctg
       61 cagacgacgg ctgtccccca gactctgcac aaagtggaac aggacccgct ggagctcagt
      121 tgcgaagtgg ccaccgagac cctccagcat acccacctct cggtatcctg gctccggcaa
      181 aagggtggcg agaaccctgt ggaggtcatt tccctgagca gagacttcat cctgcactcc
      241 agcagtgaat atgcgcagag gcagagcctg ggcgaggtgc ggctggacaa gctggggaga
      301 agcacgttcc gcctcaccat cttccacctg cagccctccg accagggcga gttctactgc
      361 gaggctgcag agtggatcca ggatccagac ggctcttggt acgccatgac caggaagcgc
      421 tctgagggtg ccgtggtcaa cgtccagccc actgacaaag agttcaccgt gcgactggaa
      481 acagataaga ggctgcacac agtgggtgag ccggtggagt tcagatgtat cctagaggct
      541 cagaacattc cagaccggta ctttgccgtc tcctgggcct tcaacagctc actcattgcc
      601 accatgggac ctaatgctgt gccagtcctc aacagcgaat ttgcccaccg tgaagccaag
      661 ggacaactta aggtggccaa agagggtgat ggtgtctttg tgctgaagat atatcacctt
      721 cgccaggaag atagtggcaa atacaactgc cgggtgactg agcgagagaa gaccgtcact
      781 ggcgagttca tcgacaagga aagcaagagg cccaagaaca tccccatcgt cgtgctcccc
      841 ctcaaaagca gcatgtccgt ggaggtggcc agcaacgcca gtgtcgtcct tgagggtgag
      901 gacctgcact tctcctgtac tgtccgcacg gtgggcaggt tgcaggcccg cttctctgtc
      961 atctggcagc tcgtggatag gcagaaccgc cgcagcaatg tcatgtggct agaccgggat
     1021 ggcaccgtgc agccgggctc atcgtactgg gagcgcagca gctatggagg catccagatg
     1081 gagcaggtgc agcccaactc cttcagcctg ggcatcttca gcagcaggaa ggaggacgag
     1141 ggccagtacg agtgccacgt gacagagtgg gttcgggctg tggatggaga gtggcagatc
     1201 gtgggagagc gccgcgccag taccttggtc tccatcacag cccttgaaac gggctttgcg
     1261 gtcacagcta tctcccggac accaggggtc acctacagcg actcctttga cttgcagtgc
     1321 atcatcaaac cccactaccc agccagagtc cccgtgtctg tgacatggag gttccagcca
     1381 gtgggcacag ttgagttcca tgacctggtg accttcacac gagatggagg ggttcagtgg
     1441 ggagacaagt cctccacctt ccgaactcgg actgccatcg agaaggctga gtccagcaac
     1501 aatgtccgcc tgagcatcag ccgggccagt gacacggagg cgggcaagta ccagtgtgtg
     1561 gcagagctgt ggcggaggaa ttacaacaat acctggacga ggctggcgga gaggacttcc
     1621 aacctgctgg agattcgggt gctgcagcca gtgacaaagc ttcaggtgag caaatcaaag
     1681 agaaccctca cactggtgga aaatcgtcca attcagctga actgctcagt caagtcccag
     1741 accagcccaa actcgcactt cgccgtgctg tggtatgttc acaaaccctc ggacgcggac
     1801 ggcaagctca ttctcaaaac cacgcacaac tcagccttcg agtatggaac ctatgcggag
     1861 gaggaaggcc tgcgaggccg gctgcagttc gagaggcatg tgtcaggggg cctgttcagc
     1921 ctcactgtgc agagagctga ggtcagcgac agtggcagct actactgcca tgtggaggag
     1981 tggctgctga gtcctaacta tgcctggtac aagctggccg aggaggtttc agggcgcaca
     2041 gaagtcaccg tgaagcagcc agacagccgc ctgaagctca gccaagccca ggggagcctg
     2101 tctattctgg agacccggca gatccagctg gagtgtgtgg tcctgaaccg caccagcatg
     2161 gcctcccagc tcgtggtgga gtggtttgtg tggaagccca accacccaga gcgggaagta
     2221 gtggcccacc tgagccgaga tgctaccttc cactatggcg aacaggctgc caaaaacaac
     2281 ctgaagggac ggctgcatgt ggagagccca tcttccggcg tgtacaggct cttcatccag
     2341 aatgtggcgg tgcaggacag cgggacctac agctgccgag tggaggagtg gctgctcagt
     2401 cccagcgggg tgtggtataa acgggctgag gacacagctg gacagacggc cgtcacagtc
     2461 atgcgacctg atgctgccct ccaggtggac acagtagtcc ccaatgccac ggtgaccgag
     2521 aaggcaactt tccagctgga ctgcagcatc ctgtctcggt caagccagga ctcccgcttt
     2581 gctgtggcct ggtattccct aaggactaaa ggcggaggga aaagaggcag ccttggcatt
     2641 gatgagcaag aggaggagga ggtgtcggaa gaggaggcct ccgaagatcc aacagagagg
     2701 acagtcctgc tgagtgtggg gcctgatgct gtctttggtc ctgaaggcag cccttgggag
     2761 ggcaggctgc gcttccagag gctctcgccc ctgctgtacc ggctcacggt gctcgaagcg
     2821 agtcctcagg acacaggcaa ctactcctgc cacgtggagg agtggctgcc cagccctcag
     2881 aagggatggt accggctgac ggaggaggag tctgccccca ttggtatccg ggttctggac
     2941 acaagttcca ccctgcagtc gctcatctgc tccaacgatg ccctcttcta ctttgtcttc
     3001 ttctaccctt tccccatctt tggcatcctc atcatcacca ttctactggt gcgcttcaaa
     3061 agccggaact ccagcaagaa ctcagagggg aagaacgggg tgcctctgtt gtggatcaag
     3121 gagccgcacc tcaactactc cccgacttgc ctggagcctc ctgtgctcag catccaccct
     3181 ggagccatag actaaggagg ttgctccccc aacagacgtt gcccatggca gggtcgggtc
     3241 agggaagcct tgtgggcttt tcctcattgc ttcgtgctct gtgattggac aggcgacagc
     3301 acccgaactc tgcagtttcg ctgcaggaac cagtcagacc tggagtgagt tggaagcttc
     3361 cggtcacgga gatgactgcc tccggcaggg gtactggtta gctattcaca cccaggtgtc
     3421 gtgacgccag agtcctaggt tcctagtttt tggtttcggt aacttagtgc gtagctccag
     3481 gtgccacatc tactggccag tctgtctcat gttctcagat cggtgctacg gggtttcctc
     3541 ttctgcgtaa tgtactcttt gaagcccctt tggtcttctc catttggatc ccataatgtt
     3601 gtggaagagt ttctctcaca gctgataagc aagaggaaga cgccttcata gtaacaagga
     3661 atctcttcca agacattttt gtttttgcac atttgaaaat gccacccgtg gatcaaaata
     3721 cacccaaaca tttttttttt ttttttttac tttcttagca agacttgaaa aatatgtgta
     3781 gcgtgggccc aatttgtatc ttatctcttc cctcagccgg agtcgttgga accactttat
     3841 agtcaagatg aaagcattga atttcgcttc aaaggactgc acatgtgcag aagaaacccc
     3901 cacagaaccc cattaggagt agatggtgtc cagccagcca gtcggttagg gaggcagcaa
     3961 aaggcttcag tcctatcctt gccaaaaaat aaacaagcca acttggaggg tgggccaagg
     4021 gctccggaag gcacctgttt ctgagggttg ccctgagcat acttacttac ctttgtactg
     4081 gaggccatga ctgggggcag gagaggggtg gttgttggct tgacttggcc agatcagtct
     4141 cttgacttac ccctgagctg gtagctttct tctgtaggtg ctttgccaga ttttcaaggg
     4201 gacatgtcta gtgaagctag aaggggctgc cctgagtggg gtgagctatc atactgagct
     4261 tcggagagtg gggagcggga gggggttcta gagcctgaca ttgagaggct ggaggaacac
     4321 ttctctctct atcttccctt cagtgagcct ttcctcggag atggtgaggg cttccttatc
     4381 catcgctgct cttcccaaat ctcagtgctg tggggatatc gtcctaggat aggaccaggc
     4441 acagcccttt gcagttgttt ttgtccccta ctttcaactg acaactcaga ccaggagttg
     4501 tcgctttcct ttgttggagt gtgtgtataa gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     4561 gtgtgtgtgt gtgtgttcgt tcaggttgtt tgattgtact ggtggctttt aattttcagc
     4621 ccacaaatcc aaactccgct gtctccactt tgcttagctg ccccagaacc tcaccaattg
     4681 caaatcctcc cttttgtctt ttgctcactc tgaccatctt gtgaaccctc tcttccccat
     4741 ccttcagtgg ccataccttc tctggggaat tttcatcccg agtcccaaga tagagctcct
     4801 tggaaaaagc tacccaagat tatgggagta aatgcaatga gtgatttctc ctgagaataa
     4861 acagacaaca cagaggctgc aggacttcca ggccactggg ccagatggtt atggagccct
     4921 ccaaggggtc tgctgggtat gggccctgtg ctgggcagag gaagggaggt aaggtgcagc
     4981 ctgacagtct ttcctcttcc ctcctggtcc tcttgttctc tgagaagtgt ccaggcagtg
     5041 ccaccttaat ccctcctgtg cctgccctgc tgattctcat ttttgctgca caaacacatc
     5101 agagggacca aattggccca gtcacagaga aagaatgtcc tttgttctgt tccttcgttt
     5161 catgggtgtg ggctcttggt gggtaattgc tgactcctga gttttaggct gagtcaatga
     5221 gggaagattg acgccagagg gctggcctgg attaagattt cagatcggct ctgtagccgt
     5281 agaaaactca cgctgcaagt aaatatgtga agcaaccgca ggacgtttgc aaggagcaaa
     5341 gaaatctatg tcagtatttt aacaactgct tttttgcgtg tattttctgt ggggcggggg
     5401 tatgcaatca aaggttaaac tctgagcttt ctatgaaaac aaaacaagac aaaacaaaaa
     5461 caaaaaagaa aggaaaaaga aaaaaaaaga aaaacccaaa ccctcaggac ttctctgtgg
     5521 ctggttctgt ggacatgtgt tgtcagataa atggtgatgg cgccctccag tggctcgaag
     5581 gcttcactgc atattgtctg ttggggcttt ggtcctcttg agtactcaat agagactcct
     5641 gacatctgtc ctctccagag atttatgaaa atctccactg tgctaggcat gtcccaggac
     5701 actatatgac cacaccctct ctcatcaggg tgtttctgta gcaagttttc atatttgttt
     5761 caaacaatgg cgtctctgcg ttcatgttga agacagagac gggataagaa gactatctgt
     5821 gcatgaagta gagaactgtt ggtttgtttc attttttaaa aggagaagct atttgtaagc
     5881 cactgcacaa agacgtttta tatacactgc agagacctgt agtaaattat gttgacaata
     5941 cgctgtttac attttctgga gtctgatgtc ctcctgcccc tcactgaacc aaccgccccc
     6001 tgctctggga ctgtgctctg tgggtggcct ggagttttgc tcttggcact gatgtaccag
     6061 attcaagttt tacaagctgt agcctttcta tgcatgccct tacccagcct aaattatggt
     6121 ttttttgtac aaatgataaa aaaaaaaaaa acctttctca agacactttt gccacatggt
     6181 gaaatgtatc acaacgctcc acctaccagg ttaagagtgc agccctggaa ctgtgacaca
     6241 ggggcccctg gggccggtta ggcagactgg aaagctgaca ttgctatggg ttgtgtaact
     6301 tttttctttg gcgggaaatg tagggtaaga gagcacccgt gagaacagcc ttccagctca
     6361 ctagggcctc tgcagcgaga cccggccaga catccttcct aggccccatt aatgatgttc
     6421 atgagcggaa gtggaccaca gccctcttcc tggctgggca gtccaggcag tgagacttgg
     6481 gcacccgtta ctgctgtcag atgctgactg agaaacactg gaatattgca ggccccagaa
     6541 gtgatcacac ttagttgggt ctttg
//
