LOCUS       XM_006248649            1232 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus immunoglobulin lambda constant 1
            (Iglc1), transcript variant X1, mRNA.
ACCESSION   XM_006248649
VERSION     XM_006248649.4
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086029) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006248649.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1232
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1232
                     /gene="Iglc1"
                     /note="immunoglobulin lambda constant 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 27 long SRA reads, 5 Proteins"
                     /db_xref="GeneID:100361706"
                     /db_xref="RGD:2319568"
     CDS             723..1097
                     /gene="Iglc1"
                     /codon_start=1
                     /product="Ig lambda-1 chain C region-like isoform X1"
                     /protein_id="XP_006248711.1"
                     /db_xref="GeneID:100361706"
                     /db_xref="RGD:2319568"
                     /translation="MRQRSSKYMLCLYSGGINSDQPKATPSVTLFPPSSEELKTDKAT
                     LVCMVTDFYPGVMTVVWKADGTPITQGVETTQPFKQNNKYMATSYLLLTAKAWETHSN
                     YSCQVTHEENTVEKSLSRAECS"
     polyA_site      1232
                     /gene="Iglc1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctttattaat gttgtctcca agatttgagg tggtttttgt tgggtaattt ccaattctgt
       61 attctagttc atgtctaacc ctcactctaa gtaaataatc tccttctcta gattctgtgt
      121 ctcatttcag actattccct gtagcctttc atgtctaatc tcaaagacat gggggctgaa
      181 acagataaac atcaatgtct gtctataatt atgttaggat atgtagcact ttgataagta
      241 ctccattgtg ctatcacctt ttaatgtcta tttttctgat aaactttgtg aggaataaat
      301 ttaattgcca tctcatggag aaggaaaacc aggggcatag agggagacac agctgttgaa
      361 tttagagagc acagtcattc agcacggagg cttgggaagg ctagataacc tgggcaatgg
      421 aactcaagat taagttccta ggacagctgg gagatagaat gaaccccaga gccttcatgg
      481 aaagacacga acagagcacc atccaagcta tgactcagga aatttaatta ggagtcaaaa
      541 ggggagggag ctctggccac agaaattcaa gagaagagag atatctgttg ggaatctggg
      601 ctcctaggat tctctaaaag actgcttaga agacacagca actaagttca catacatctg
      661 gtcctgatgc atgaaaatca tgtaactcat ccagagatgt gaatattccg tcattctgta
      721 ggatgagaca aaggtcaagc aagtacatgc tctgcctgta ctcaggagga ataaactcag
      781 accaacccaa ggctacgccc tcagtcaccc tgttcccacc ttcctctgaa gagctcaaga
      841 ctgacaaggc tacactggtg tgtatggtga cagatttcta ccctggtgtt atgacagtgg
      901 tctggaaggc agatggtacc cctatcactc agggtgtgga gactacccag cctttcaaac
      961 agaacaacaa gtacatggct accagctacc tgcttttgac agcaaaagca tgggagactc
     1021 atagcaatta cagctgccag gtcactcacg aagagaacac tgtggagaag agtttgtccc
     1081 gtgctgagtg ttcctaggtc atctgacttt catcttaccc acagagactt ggatcagaaa
     1141 catgtccaag tgtacctata ctgcttttgc ctaccatagc ccttctccct attctcaaaa
     1201 tgcacaataa aatgtctatt cacaacctct aa
//
