LOCUS       NM_001271494            3455 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus intraflagellar transport 70A1 (Ift70a1), mRNA.
ACCESSION   NM_001271494 XM_003753741
VERSION     NM_001271494.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3455)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Sep 29, 2012 this sequence version replaced XM_003753741.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360194.502156.1,
                                        SRR26360181.68182.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3455              JAXUCZ010000003.1  81309158-81312612   c
FEATURES             Location/Qualifiers
     source          1..3455
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q23"
     gene            1..3455
                     /gene="Ift70a1"
                     /gene_synonym="Ttc30a; Ttc30a1"
                     /note="intraflagellar transport 70A1"
                     /db_xref="GeneID:100362431"
                     /db_xref="RGD:2318157"
     exon            1..3455
                     /gene="Ift70a1"
                     /gene_synonym="Ttc30a; Ttc30a1"
                     /inference="alignment:Splign:2.1.0"
     CDS             224..2218
                     /gene="Ift70a1"
                     /gene_synonym="Ttc30a; Ttc30a1"
                     /note="tetratricopeptide repeat domain 30A;
                     tetratricopeptide repeat domain 30A1"
                     /codon_start=1
                     /product="tetratricopeptide repeat domain 30B"
                     /protein_id="NP_001258423.1"
                     /db_xref="GeneID:100362431"
                     /db_xref="RGD:2318157"
                     /translation="MAWQSSSKVPDGEFTAVVYRLIRDSRYSEAVQLLSAELQGSPRS
                     RAGLSLLAYCYYRLQEFELAAECYEQLSQMHPELEQYRLYQAQALYKACLYPEATRVA
                     FLLDNPTYQTRVLRLQAAIKYSEGDLPGARSLVEQLLSGEAGEDSGGENDPDGLVNMG
                     CLLYKEGHYEAACSKFLAALQASGYQPDLSYNLALAYYSSRQYAPALKHIADIIERGI
                     RQHPELGVGMTIEGIDIRSVGNTAVLHQTALIEAFNLKAAIEYQLRNFEVAQETLTDM
                     PPRAEEELDPVTLHNQALMNMDAKPTEGFEKLQFLLQQNPFPPETFGNLLLLYCKYEY
                     FDLAADVLAENAHLTYKFLTPYLYDFLDAMITCQTAPEEAFIKLDGLAGMLTDQLRRL
                     TKQVQEARHNRDDEIIKKAVNEYDETLEKYIPVLMAQAKIYWNLENYQMVEKIFRKSV
                     EFCNDHDVWKLNVAHVLFMQENKYKEAIGFYEPIVKKNYDNILGVSAIVLANLCVSYI
                     MTSQNEEAEELMRKIEKEEEQLSYEDPDKKIYHLCIVNLVIGTLYCAKGNYDFGISRV
                     IKSLEPYHKKLGTDTWYYAKRCFLSLLENMSKHMIVLCDGVVQECVQFLEHCEIFGRN
                     IPAVLEQPLEEERIHTGKNTVTYESRLLKALIYEIIGWNM"
ORIGIN      
        1 aatatctgga ctgcttgtaa cagttttcta tcccttctca aacttctgtc cctacccagt
       61 ttgtgtctta taacacaaaa caaaaattca gagactatgt taacagttcc tagtcatatc
      121 gaacagattc tacctcagag ctaaccgccg ccccttggat gaacttccgt ttccggttac
      181 ttagttgcct tggaaactag cacgcgccac aattttggcg gctatggcgt ggcaaagcag
      241 ctcgaaagtt cccgacggtg agttcacagc ggtggtgtac aggctcatcc gcgactcccg
      301 ctactcagag gcggtgcagc tactgagcgc agagctgcag gggagtcccc gcagccgcgc
      361 agggctgtcg ctgctggcct actgctacta ccgcctgcag gagttcgagc tcgctgcgga
      421 gtgctatgag caactgagcc agatgcatcc ggaactcgag cagtaccgcc tgtatcaggc
      481 ccaggcgctc tacaaggcct gcctgtatcc agaggccacc cgggtcgcct tcctcctgga
      541 caaccccacc tatcagactc gagtccttcg tctgcaggct gctatcaagt acagtgaagg
      601 ggatctccca ggagccagga gcttggtgga gcagctgctg agtggggaag ctggagaaga
      661 cagtggaggg gagaatgacc cagatggctt ggtcaacatg ggttgtctgc tctacaagga
      721 gggacactac gaagctgcct gttccaagtt cttagcggcc ctgcaggctt ctggttacca
      781 acctgacctt tcctacaact tggctttagc ctattacagc agtcggcagt atgcgcctgc
      841 tctgaagcat atcgctgaca tcattgagcg tggcatccgt caacacccag aactaggtgt
      901 gggcatgacc attgaaggca ttgatattcg tagtgtcggc aacactgcag tccttcatca
      961 gactgctctg atcgaagcct tcaacctcaa ggcagccata gagtaccagc tgagaaactt
     1021 tgaggtagcc caagaaaccc tcactgacat gccacccaga gcagaggaag agttggaccc
     1081 cgtgaccctg cacaaccagg ctctgatgaa catggatgcc aagcccacag agggctttga
     1141 aaagctccag tttctgctcc agcaaaaccc cttcccccca gagacctttg gcaacctgct
     1201 gctgctttac tgtaaatatg agtatttcga cctggcagct gatgttctag cagaaaacgc
     1261 ccacttgact tacaagttcc tcacacccta tctctatgac ttcttggatg ccatgatcac
     1321 ttgccagaca gctcctgaag aggctttcat taaacttgat gggctagcag gtatgctgac
     1381 tgaccagctc aggagactca ctaaacaagt tcaagaagca aggcataaca gagacgatga
     1441 aattattaaa aaagctgtga atgaatatga cgaaaccctt gagaagtata tccctgtact
     1501 gatggcccag gcaaaaatct actggaatct tgagaattat caaatggtgg agaagatctt
     1561 ccgcaaatct gtggaattct gtaatgacca tgatgtgtgg aagctgaatg tggcccatgt
     1621 cctcttcatg caggaaaaca agtacaagga ggccattggt ttctatgagc ccattgtcaa
     1681 gaagaattat gataacatcc tgggtgtcag tgctatcgtg ttagctaacc tctgtgtttc
     1741 ctacattatg acaagtcaaa atgaggaagc tgaggagctg atgaggaaga ttgagaaaga
     1801 ggaggaacaa ctctcctatg aagacccgga caagaaaatc taccaccttt gcattgtgaa
     1861 tttggtgata ggaacccttt attgtgccaa aggaaactat gactttggca tctctcgggt
     1921 tatcaagagc ctggagcctt accataagaa gctgggaact gatacgtggt attatgccaa
     1981 aagatgcttc ctgtccttac tggagaacat gtcaaagcac atgatagttc tttgtgatgg
     2041 tgttgttcaa gaatgtgtcc agtttctaga gcactgcgag atttttggta gaaacatccc
     2101 tgctgttctc gaacaaccct tggaggaaga aagaattcac actggaaaga atacagtcac
     2161 ttatgagtcc agactgttga aagctttgat ttatgagatc atagggtgga atatgtagta
     2221 cattctgtta atgactttta caacaaaggc tttgttatgt tggcactgtg tttcaactct
     2281 aagctttaac attctcacac tctttacatg ttgcacattg tctaccttaa atgcttattc
     2341 aattagatac agcttttcct gatgagaaac tccaccaaat gaacgtaacc aatgaaccca
     2401 gaagcactta tttaaaattt gagaactgaa tgagaaagca ccatccagtc gggtttataa
     2461 catcctttcg ttgctgtttc acactttgct ttattgctag tgtgctgtct gtgaaccatc
     2521 atgttatcca tggaggacaa gtatcgaaca tgagccttag ttacatgaca cttggacttt
     2581 cgaggtcgtt tcagggatta cacgttctgc tttagctcac cctcattatt tgtagtgcag
     2641 aagttttgta cacttgtgga ttttaaagct tttttcagtg tcttggcgtt ttttattttt
     2701 taaagaagta acatttaaca aaagtcttca tgttgttagt ggctcttttg tagaatgtgc
     2761 aaaatccagt gtgaaatttt gctcctaaat aaaaaactac agtgcggtgg tttgaagcta
     2821 ataaactgag aaatatctca tgttttactg ttcataattg acctttaata gtgattgata
     2881 atataagtaa ttttaaaaat caatatttaa ttcctatacc ggtgtcactt tttgaaggca
     2941 caatgctggg attttgtttc tctgtttctt cagaaaggca agtacatttt attctatttg
     3001 acattatcaa agtcccttct gatattaatg gtgtataaat attgatacat gaaattatat
     3061 ttatataata taaagttaaa atataaaaag tatctgggac ttttttcttc gttttaccag
     3121 ttccctggcc acagtcttcc cagttacctc tcaggggaat tctaggggga gtgctcctca
     3181 ctgtactcaa gaacttcatt ccctaaaagt gtaaagtaaa gccttgtttt ttccatgatg
     3241 tccttttgtt cttaataatt gtcggtctat cttacagaac atcaagaaga aaatttaggc
     3301 ttggaaagaa caaaacactt ttcttccaga aaaatgggag tcacttatat gtttaaaggg
     3361 gttgtgtaga catatgaagt atagcatata cattctacat tcatacacat tcaaccatct
     3421 ctttaggtag agaaataata atagcataat agtaa
//
