LOCUS       NM_001107925             886 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus interferon kappa (Ifnk), mRNA.
ACCESSION   NM_001107925 XM_001065680 XM_232873
VERSION     NM_001107925.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   LaFleur DW, Nardelli B, Tsareva T, Mather D, Feng P, Semenuk M,
            Taylor K, Buergin M, Chinchilla D, Roshke V, Chen G, Ruben SM,
            Pitha PM, Coleman TA and Moore PA.
  TITLE     Interferon-kappa, a novel type I interferon expressed in human
            keratinocytes
  JOURNAL   J Biol Chem 276 (43), 39765-39771 (2001)
   PUBMED   11514542
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473962.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001065680.1, XM_232873.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ219941.1, BF561729.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q21"
     gene            1..886
                     /gene="Ifnk"
                     /gene_synonym="If1fa"
                     /note="interferon kappa"
                     /db_xref="GeneID:313152"
                     /db_xref="RGD:1309045"
     exon            1..577
                     /gene="Ifnk"
                     /gene_synonym="If1fa"
                     /inference="alignment:Splign:2.1.0"
     CDS             1..576
                     /gene="Ifnk"
                     /gene_synonym="If1fa"
                     /note="interferon 1fa"
                     /codon_start=1
                     /product="interferon kappa precursor"
                     /protein_id="NP_001101395.1"
                     /db_xref="GeneID:313152"
                     /db_xref="RGD:1309045"
                     /translation="MTLKYLWLVALVALYISPIQSQNCVYLDHTILENMKLLSSIRTT
                     FPLRCLKDITDFEFPQEILLYVQHVKKDIKAVTYHISSLALIIFSLKDSISLATEERL
                     ERIRSGLFKQVQQARECMVDEENKNTEEDSTSQHPHSEGFKAVYLELNKYFFRIRKFL
                     VNKKYSFCAWKIVVVEIRRCFSIFYKLLNMN"
     exon            578..886
                     /gene="Ifnk"
                     /gene_synonym="If1fa"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgacactga agtatttatg gctggtggcc ctcgtggctc tatacatttc acccatccag
       61 tctcagaact gtgtgtatct ggatcatacc atcttggaaa acatgaaact tctgagcagc
      121 atcaggacca cctttccctt aagatgtcta aaagatatca cggattttga gtttcctcaa
      181 gagattctgc tgtacgtcca gcatgtgaaa aaggacataa aggcagtcac ctatcatata
      241 tcttctctgg cgctaattat tttcagtctt aaagactcca tctccctggc gacagaggaa
      301 cgcttggaac gtatcagatc gggacttttc aaacaagtgc agcaagctcg agagtgcatg
      361 gtagacgagg agaacaagaa cacggaggag gacagtacat cacaacatcc tcactcagag
      421 ggcttcaagg cagtctacct ggaattgaac aagtatttct tcagaatcag aaagttcctg
      481 gtaaataaga aatacagttt ctgtgcctgg aagattgtcg tggtggaaat aagaagatgt
      541 ttcagtatat tttacaaact actcaacatg aattgagaat catccagctt caagcaagaa
      601 cttagataga agttgtgact gctcaaatgt ccccaagaac gcttgattct aaggctattg
      661 cgagtctgct gctacacact tcggacgcaa gacttttcaa ggtcagggtt caaggcagta
      721 cagtcaaagg aagtcttatg ttaagcaaaa gaaaaatttc agtggaaaag ctagcagaaa
      781 tgtcaacttg tcaaaaaaac aacttatgga ttatggcatt gacgttacta gcaaaaaaaa
      841 taaaacaaaa aaaaacaaca gtcactaaaa tgagtgaata taatct
//
