LOCUS       XM_002728832            2323 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interferon induced transmembrane
            protein 5 (Ifitm5), mRNA.
ACCESSION   XM_002728832
VERSION     XM_002728832.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_002728832.6.
            
            On Jan 21, 2021 this sequence version replaced XM_002728832.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2323
                     /gene="Ifitm5"
                     /note="interferon induced transmembrane protein 5; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 5 ESTs, 24 long SRA reads, 4 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 11 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:293617"
                     /db_xref="RGD:1307900"
     CDS             1639..2043
                     /gene="Ifitm5"
                     /codon_start=1
                     /product="interferon-induced transmembrane protein 5"
                     /protein_id="XP_002728878.1"
                     /db_xref="GeneID:293617"
                     /db_xref="RGD:1307900"
                     /translation="MDTSYPREDPRAPSSRKADAAAHTALSVGTPGPTPRDHMLWSVF
                     STLYLNLCCLGFLALVHSVKARDKKVAGDLEAAKQYGSKAKCYNILAAMWTLVPPLLL
                     LGLVVTGALHLSRLAKDSAAFFSTKFDEEDYN"
ORIGIN      
        1 actcagctgt cgtgaggacc accgtgatca acatgcccag agaggtctct gtgcctgacc
       61 atgtggtctg gtccctgttc aatacgctct tcttcaatgc ctgctgcctg ggcttcattg
      121 cctatgccta ctctgtgaag ctcacctcat gaggaagaca tggcaggaca gaaggcagac
      181 agaaggcaaa gaggcctgtg agggctggac agatggccca gcaattaaga gcatacgctg
      241 ccctgacaga ggacccaggc tgattccaag catccacttc aggtgactca cctacactcc
      301 agctctagaa attcaacact actggcctcc gtgggcacct gcactcatgt gtacatacac
      361 acacaccctc gtatatataa ttaaaaataa tgaaaataaa tattaaaaaa aagaggtctc
      421 tgagatgaac agagctggca gaaacagcac ctacactgat ggtgaggatg ccaaggcact
      481 gatgtacagg cacttggcag ggcaggtata ggcctgggct ccaaatatta cccattgttc
      541 tcctgtcccc aggctggagg agactagatg acaggggatc ttggagaaag tcatctggaa
      601 gccagatgct ctgactaggt ccctgtcatc ctctctggtc actgcagcct ctctacatcg
      661 tgatggtcag ggaccctctc tcccttctca tgtactgtcc tggagggccc aaaactgctt
      721 gcttgatgtc tagcgatcag agtgggtatg agcaggaaaa gccaaggctt tgggcctgaa
      781 cagctgaggg agactgggca gtgctgatgt gaaggaggat ttaggtcttg ctaaggattt
      841 gagctgggaa gacactgagg tcccctttac caaggaggct cttggcctgt gagcctggag
      901 tcagacttcc tgccggacat gcattgagtt cttggcacac acaggtatct gaagtctcaa
      961 ggaaactatt ccacacccag ttttaggatt gggaagggca ggacaacagg ccaaggagac
     1021 tgaagagggt cttcctgccc gggagctgga gaaatgccca tcacagggaa aggggaggag
     1081 ctgcctacag tttgtggtgg gaagggggca gactccttca ttgctccttc ctgcctgctc
     1141 tcttcttagc attcgtctct agcaggtgtg cgtttgctct tccgtctgtg catgtcagca
     1201 gatgccatga tcaaagcctg gatcctgagt tctggagggc catgggatat gtagctctgg
     1261 gcttgaggag agggcctggg tgtcccctga aactgaggca gcctcatgct cactcagccc
     1321 tagggccccc catggaactg tttgcagcca gtgtccttgg ggcagccttt tgtgaacagt
     1381 caagacagca gggggactct ggtgggtggt ctgcagccac cgaacatgtg gcgcagtggc
     1441 ctttgatggg gtctttcgag aggggtgggg gatgctcggc tgcaagggcg tgccactcta
     1501 tttggcaggc cgaggctgta atttgtgata tatatagcgg gtggagctgg tcagccaggg
     1561 agggtagtga ggggctataa gcgggcctgg tgctcagaga gcacaagtct cagctaggaa
     1621 gacacggcgc tggaacccat ggacacttca tatccccgtg aggacccccg ggccccatca
     1681 tcccgcaagg ctgatgctgc agcccacacg gccctctctg tggggacacc cggccctacg
     1741 ccacgagacc atatgctctg gtctgtcttc agcacgctgt acctgaatct gtgctgcctt
     1801 ggtttcctgg cgctggtcca ctctgtcaag gcccgagaca agaaggtagc cggggacctg
     1861 gaggctgcaa agcagtatgg ctccaaagcc aagtgctaca acatcctggc tgcaatgtgg
     1921 acactggtgc ccccattgct gctcctggga ctggtggtga ctggcgcctt gcacctgtcc
     1981 cggctagcca aagactctgc ggctttcttc agcaccaagt ttgatgagga ggactataac
     2041 tgagagttct gagcctgtcc tgaaccaacg acaaccatgc caggtcagct gtgcccaaca
     2101 ccagctcttg ggagttatag cttactatag cacctcgatc cctgcccaac cacaacctca
     2161 gaggccaccc tctttgtcca ccaagtgttt tcgatggtga cccactcaga tccctcagac
     2221 ttaaacctct aacttagagg gtcctcggtg cctggctttg ccccttttcc ccacttacca
     2281 ggccgagcct ccgttcacga ttaaaagtgg cagattccag aaa
//
