LOCUS       XM_017590475            1410 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interferon induced transmembrane
            protein 10 (Ifitm10), mRNA.
ACCESSION   XM_017590475
VERSION     XM_017590475.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 9% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1410
                     /gene="Ifitm10"
                     /note="interferon induced transmembrane protein 10;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 10 ESTs, 3 Proteins, and 93% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:293632"
                     /db_xref="RGD:1563319"
     CDS             1..951
                     /gene="Ifitm10"
                     /codon_start=1
                     /product="interferon-induced transmembrane protein 10"
                     /protein_id="XP_017445964.1"
                     /db_xref="GeneID:293632"
                     /db_xref="RGD:1563319"
                     /translation="MGTKWSAQQTDLPGPEDPFEHRWSRGGGGGVCDAAVSQALAAAT
                     AGLALRSARGQRGRQRRQPRSLPAPKVGPLGRDQRADSGPGERKDARSEAQGSDPLAE
                     SPVGERYWWLLQPTAQGPSQCPALLGAPASTTDGTQEARVPLDGAFWIPRPPAGSPKG
                     CFACVSKPPALQAAAAPAPEPSASPPMAPTLFPMESKSSKTDSVRASGVPQACKHLAE
                     KKTMTNPTTVIEVYPDTTEVNDYYLWSIFNFVYLNFCCLGFIALAYSLKVRDKKLLND
                     LNGAVEDAKTARLFNITSSALAASCIILIFIFLRYPLTDY"
ORIGIN      
        1 atgggaacaa agtggagtgc tcagcagaca gacttgccag gacctgagga cccatttgag
       61 cacaggtgga gtaggggagg aggcggaggt gtctgcgacg ctgccgtgag tcaggctctg
      121 gctgcagcca cggccggcct ggcgctgcgg agcgcgcgcg ggcagcgggg gaggcagcgg
      181 cgccagcccc gctcgctccc cgcccccaag gttgggccgc tgggacgcga tcagcgggca
      241 gacagcggcc cgggagagcg gaaggacgcg cgctccgagg ctcaggggtc cgacccactc
      301 gccgagtcgc cagtaggtga gcggtactgg tggctgctgc aaccaacggc ccagggcccc
      361 agccagtgcc cagccctgct gggagccccg gctagcacca cggacggcac ccaggaagcc
      421 cgagtccccc tggacggggc cttctggatt cccaggccac cagcaggttc gcccaagggc
      481 tgcttcgcct gtgtttccaa gcctcctgcc ctgcaggctg cagcagctcc agctcctgag
      541 ccttcagcct cgccccccat ggcacccacc ctgtttccta tggagtctaa aagcagcaag
      601 acagacagcg ttcgggcatc gggtgtcccg caagcctgca agcacttagc tgagaagaag
      661 accatgacga accccacaac agtcatcgag gtctaccccg acaccacaga ggtgaacgac
      721 tactatctgt ggtccatctt caacttcgtc tacctcaact tctgttgcct gggcttcatt
      781 gctctggcct actccctcaa agttcgggac aagaagctcc taaatgacct gaatggagcc
      841 gtggaggatg ccaagacagc acggctgttt aacatcacca gttctgcatt ggcagcctcc
      901 tgcatcatcc tcatcttcat tttcctgcgg tacccgctca ctgactactg agctagcagg
      961 caatgggtct tggagaccca gcactgagac tgatggtcac tgagattcag gatgctgagt
     1021 atgtggggca gaatgggctc ccaccaaggc ccagagccat gcatggcatc aaggccacca
     1081 gaagctgagt gcccgaccga gtagagcact cttcccagcc accctgtctg ccgcctgcct
     1141 ctgtcctgct ggcaccggga ctctgggctt cctcccatga tgctgcctgg ttcccagtgg
     1201 ctgccctccc tgacccatgc accctgccca ggatcctgga cccctcagac ctgataccca
     1261 gcaagaaggg cttacatggg agctcctgaa ataggggctg ccagcacctg gggttcccaa
     1321 actcctgacc cccaacttct tccaagctgt gaccccttgc tccaagctct tgtatctgtg
     1381 aactttcatt aaaacttgtg ctcagctcaa
//
