LOCUS       NM_172019               1874 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus interferon gamma inducible protein 47 (Ifi47),
            mRNA.
ACCESSION   NM_172019
VERSION     NM_172019.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1874)
  AUTHORS   Gilly,M. and Wall,R.
  TITLE     The IRG-47 gene is IFN-gamma induced in B cells and encodes a
            protein with GTP-binding motifs
  JOURNAL   J Immunol 148 (10), 3275-3281 (1992)
   PUBMED   1578148
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AF508023.1 and JAXUCZ010000010.1.
            
            On Oct 23, 2010 this sequence version replaced NM_172019.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF508023.1, BC066660.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-273               AF508023.1         18-290
            274-1874            JAXUCZ010000010.1  33804774-33806374
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q21"
     gene            1..1874
                     /gene="Ifi47"
                     /note="interferon gamma inducible protein 47"
                     /db_xref="GeneID:246208"
                     /db_xref="RGD:708470"
     exon            1..152
                     /gene="Ifi47"
                     /inference="alignment:Splign:2.1.0"
     exon            153..1874
                     /gene="Ifi47"
                     /inference="alignment:Splign:2.1.0"
     CDS             172..1434
                     /gene="Ifi47"
                     /note="interferon gamma inducible protein 1"
                     /codon_start=1
                     /product="interferon gamma inducible protein 47"
                     /protein_id="NP_742016.2"
                     /db_xref="GeneID:246208"
                     /db_xref="RGD:708470"
                     /translation="MDQFITAFLKGASEKNFQQLAMEFLPQYSALISKSGGMLSPETL
                     SAIHYALQEGRLSDVMNQIQEAISAAENAVLEVAVIGESGTGKSSFINALRGLGHEEA
                     ESADVGTVETTMYKTPYQHPKYPNVIFWDLPGTGTPNFHTDTYLDRVGFANYDFFIII
                     SSSRFSVNDALLAQKIKDAGKKFYFVRTKVDSDLYSEERTRPRTFRKEQVLQRIRDYC
                     LSNLTDIGVSEPRIFLISNFDLDAFDFPKLEETLLKELPGHKRHMFALLLPNISDASI
                     ELKKHFLQEKICLEALKSGAMSFIPFMPFISGFDLPQQEQCLKDYRSYFGLDDKSIEE
                     IAERLETPLEDIKGQLKCLDFWSFVKDDSIIARARSAGEAFCSVKGGLGSSVVQALKV
                     YYMRTQFLNVVVEDAKHLLRKMETVNIA"
ORIGIN      
        1 ggggctcatt gctccagact ccgtggaagc tctccctgtc ttctgttctc cttcatactt
       61 tcctgaagga gggcagacct gtgcggttgg tggtggttgt gctgtgggct gcagtgagca
      121 acagactcgg tattttctac tttttggatc tgatcttcct tggtaactgc catggatcag
      181 ttcatcacag ccttcctgaa gggcgcttca gaaaagaatt tccaacagtt agccatggag
      241 tttctgcctc agtactctgc actaatcagt aagtcaggag gcatgctctc tccagaaact
      301 ctgtctgcta ttcattatgc cctccaggag ggaagactct ctgatgtcat gaaccagatt
      361 caggaagcaa ttagtgctgc agagaatgct gtcctggagg tggctgtgat cggggagtct
      421 gggactggca agtcaagttt cataaatgcc cttcgagggc tgggtcatga agaagcggaa
      481 tccgctgatg tcgggactgt ggagaccact atgtataaaa ccccctatca acatccaaaa
      541 tatcccaatg tgatcttctg ggacctgcct gggactggga ctcccaattt ccacacagac
      601 acttacctag acagagtggg atttgccaac tacgacttct tcatcatcat ttcttcttcc
      661 cgcttcagtg tcaatgatgc tctcttggcc cagaaaatta aggatgctgg gaagaagttc
      721 tactttgtta ggaccaaagt ggacagtgac ttatatagcg aagagagaac cagacccaga
      781 accttcagga aggaacaagt ccttcagcgt attcgagact actgcctgtc taatctcaca
      841 gatattggag tgtctgaacc acgcatcttc ctgatctcca actttgatct ggatgctttt
      901 gatttcccaa agctggagga gactttgctg aaggagctcc ctgggcacaa gcgtcatatg
      961 tttgccctgc tgttgcccaa tatctctgat gcctccattg agctaaagaa gcattttctt
     1021 caggagaaga tctgtcttga ggccctgaag tcaggagcta tgagcttcat cccctttatg
     1081 cccttcatca gtggctttga tttgcctcaa caggagcagt gcctgaagga ttaccgaagc
     1141 tattttggct tggatgataa gtcgattgaa gagatcgctg aaaggctgga gacacccttg
     1201 gaagacatca agggccaact caagtgcttg gatttctggt cctttgtaaa ggatgacagc
     1261 ataatagcac gggccaggag cgctggtgaa gctttttgtt ctgtgaaagg aggcctcggg
     1321 tcttctgtcg tccaggcttt gaaagtctac tacatgcgca cacagttcct taatgtggtg
     1381 gtcgaagatg ctaaacatct cctcagaaag atggaaacag tcaacattgc ctagccaacc
     1441 aggaaatgaa tttcagggct cccatgtcca aattggcaag gggctgggtt gtccttccac
     1501 caaactccca gacctgctct tccctaagct ctacagtagt ggcccatgga gaggtccatt
     1561 gctttccttt agagatcact accatgagtg aactgttttc ttgttttttt gtttgtttgt
     1621 tttgtttttt gccccatgcc ctgttttctg tgttcgttga tttattattc ttgataatag
     1681 ccagcaatac catgccagct gcttctccat gttgagagat aacctatttc tgatccattt
     1741 acaccaataa aaaaaacagt ctgtaataac aaggtgagtc ttagacatca ccatttccca
     1801 attcctttta tcactcattt tatcctttca actccctcct cactgaaata aagaatggtc
     1861 tataaatctg tgaa
//
