LOCUS       XM_227820               2157 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interferon-induced protein 44-like
            (Ifi44l), transcript variant X1, mRNA.
ACCESSION   XM_227820
VERSION     XM_227820.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_227820.10.
            
            On Jan 21, 2021 this sequence version replaced XM_227820.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2157
                     /gene="Ifi44l"
                     /note="interferon-induced protein 44-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 ESTs, 3 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     81 samples with support for all annotated introns"
                     /db_xref="GeneID:310968"
                     /db_xref="RGD:1595861"
     CDS             141..1580
                     /gene="Ifi44l"
                     /codon_start=1
                     /product="interferon-induced protein 44-like isoform X1"
                     /protein_id="XP_227820.6"
                     /db_xref="GeneID:310968"
                     /db_xref="RGD:1595861"
                     /translation="MNMLGLRGSYRNTKVTTRLTWIEEKILEKLLGNASLTLLYQSNV
                     HKRCTLEMTKKCSLQGSTMTIVYLEQEVVGVFMLEDFPDKDSKKTSTCAWFSFERNKI
                     SSGISALVLNTLVKVNSTSLQMSSISGLTLIVYPSKEGLYLNEAVIKNLELNVKQSQY
                     LECEIFRVDGIKNNPGFIKKMVTARQHRGKFLSTLRAYRPYADLVSEVRILLVGPVGS
                     GKSSFVNSVKSSFQGRLTRQAIVGSDKSSITTQYKVYSIKDEKNKETLPFMLCDSMGL
                     EDEKEAGLCTDDIPHILKGCVPDRYQFNPREPIKLKHFTYAASPPLKDRIHCVAFVLD
                     INSVDTLSDKMVAKLKKIRKDVVDCGVGCVALLTNVSDYDEVLDNNLVNMTENMTSLN
                     QVQNVRNMLNIPVANILMVSNYASERMLEPLKDVLIFAALQQMLRAADDALEDLPLED
                     TASDDGSFNNSSHIKNEGKLGEVKRREMS"
ORIGIN      
        1 ctgttatgac tttcagtttt gtttctttgt gtgtgtgtgt gtgtgtgtct ctagaaccta
       61 aagcagagct ttcaatccac caactgctcc gccacagccc agataaaagg acttctctac
      121 ttaattaatt taccctctag atgaatatgc tcggtctcag aggcagttac aggaacacaa
      181 aagtgacaac cagattgaca tggatagagg agaagattct ggaaaagctg cttgggaacg
      241 cttctttgac tcttctttat cagtctaatg ttcacaagcg gtgcactttg gagatgacta
      301 aaaaatgttc tcttcaggga tccacaatga caatagttta cctggagcaa gaagttgtgg
      361 gtgtttttat gctggaggat tttcctgata aagattctaa aaaaacatct acttgtgctt
      421 ggttttcctt tgaaaggaat aaaatcagct ctggaatatc agctttggtt ttgaacacac
      481 tagttaaagt taattccaca agtttgcaaa tgtcctcaat cagtggtttg acactcattg
      541 tatatccaag caaagaagga ctttatctaa atgaggcagt aataaaaaat ctagaactca
      601 atgttaaaca atctcagtat ttggaatgtg aaatttttcg agttgacggc attaaaaaca
      661 atccaggctt cataaagaag atggtgactg ccagacagca tcgaggaaaa ttcctctcca
      721 ctctcagagc ctacaggcct tatgcagact tggtttcaga agttcgtatt ctcttggtgg
      781 gcccagtagg ttcaggaaaa tccagctttg tcaactcagt gaagtcctct ttccaaggcc
      841 gcctaactcg ccaggccatc gtggggtctg acaaaagcag catcaccacg cagtacaaag
      901 tctattctat caaagatgaa aagaacaagg aaacacttcc atttatgctg tgtgattcaa
      961 tggggctgga ggatgagaaa gaagcagggc tgtgcacaga tgacattcct cacatcttaa
     1021 aaggctgtgt accagacagg tatcagttca acccacgtga gccaattaag ctgaaacact
     1081 tcacttacgc tgcctctcca cctctgaagg acaggattca ctgtgtggct tttgtcctag
     1141 acatcaactc tgtcgataca ctatctgata aaatggtggc aaagctgaaa aaaattcgaa
     1201 aagatgtagt agactgcggt gtaggatgtg tagccttgct tacaaatgtg agtgactatg
     1261 atgaggttct cgacaacaat cttgtaaaca tgacagaaaa tatgacttct ctaaaccagg
     1321 tacagaatgt ccgaaacatg ctaaatattc ctgtggctaa tatcttgatg gtcagcaatt
     1381 atgcttcaga gcgaatgttg gagcctctga aggatgttct gatctttgct gcactccagc
     1441 agatgttgag ggctgcggat gatgccttag aagacttgcc tctcgaggac actgcatcag
     1501 atgatggctc cttcaacaat tcatcacata tcaaaaatga aggcaaactc ggagaagtga
     1561 agagaagaga gatgtcctag gacaaatagg cttccatatg cccacacaat ctatagtttt
     1621 atatgcagaa aacagaggtg tcaggtcccc ctggaactga agcaggggct catgagccat
     1681 ctgatgtgta tgcacattta catgtgtcat tctcaagctt cttaagcaaa acaaacttag
     1741 ccttgctttt gcttccccag cacattatgc tatgtgttct aattggtggc acagcagcaa
     1801 caaaatgatg taggtgtcag ccatttcaaa aagagaatgg gttcttgaga aacaggattg
     1861 gatttgcctt gtagtcacag agctcatcac aatgtctagt aagcattaag atactcataa
     1921 ctcctattta ccactttctc caacttgatg atatttactt aggtatctac tccatatgta
     1981 tgagaggaca tagagactaa gatgcgggaa agaggacttt tcacttgtct ctggttgaaa
     2041 ggatgggtgt ccctaaataa attgaaatga attgaaaagc gctgatatct gttaacaact
     2101 tgattaatta tattaatgtt ttaatttcat gaaataaact ttcttgctaa atgtttc
//
