LOCUS       XM_039111707             765 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus interferon, alpha-inducible protein 27
            (Ifi27), transcript variant X1, mRNA.
ACCESSION   XM_039111707
VERSION     XM_039111707.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..765
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..765
                     /gene="Ifi27"
                     /gene_synonym="Ifi27l; Ifi27l1; IRG1; isg12(a)"
                     /note="interferon, alpha-inducible protein 27; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 29 ESTs, 57 long SRA reads, 5 Proteins, and
                     95% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:170512"
                     /db_xref="RGD:69404"
     CDS             141..590
                     /gene="Ifi27"
                     /gene_synonym="Ifi27l; Ifi27l1; IRG1; isg12(a)"
                     /codon_start=1
                     /product="interferon alpha-inducible protein 27 isoform
                     X1"
                     /protein_id="XP_038967635.1"
                     /db_xref="GeneID:170512"
                     /db_xref="RGD:69404"
                     /translation="MALSGTGLNLLAQTALGSGASALGSALGALKAGTVLSSLPASAL
                     AVCPIGVKTAVAMLGGAMTVAAVPPVLSAVGFTGSGIAASSLAAKLMSVSAIANGGGV
                     PAGGLVATLQSAGAAGLSMTSKVLVGSTGSAVVASVMGVCKHLYSFL"
ORIGIN      
        1 tggctgtctt cagtcacgag gtgtatcttc acccagagtg gacttctaag gcctggaggg
       61 aactgggaca ccaaaaccta tctcatcctc tcacttacat cactgggttt ggctcctatc
      121 tggaacgcac accggtcccc atggcattgt ctggcacagg gctcaacttg ttagcccaga
      181 ctgcactggg ctctggagct tctgcacttg gatctgcatt gggagcactg aaggctggca
      241 ccgttttatc cagcctccct gcctccgcct tggctgtttg ccccattgga gtcaagactg
      301 ctgtcgccat gcttggggga gccatgacag tagctgcggt tccacctgtg ctgagtgccg
      361 tgggcttcac tgggtcaggc attgcagcct cctctctagc agccaagctg atgtctgtgt
      421 cagccattgc taatgggggc ggagtcccag ctggtggcct ggtggccact ctgcagtctg
      481 ctggagctgc tggactctcc atgacatcta aggtcctcgt gggctctaca gggtctgccg
      541 ttgtggccag tgtgatgggt gtctgtaagc atttgtactc cttcctctga taattgtact
      601 tggaaaccaa ggtggctgac atggcaagag aggaggcaga catgggaaca gaggtgtcgc
      661 cactcagctt gtctaatccg gagagggatt aattagcccc aggggacaat ttactatcac
      721 agattgccta cgtggaaata agaaataaaa ccaagtgctt gccaa
//
