LOCUS       NM_001192008            1022 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus isopentenyl-diphosphate delta isomerase 2 (Idi2),
            mRNA.
ACCESSION   NM_001192008 XM_577595
VERSION     NM_001192008.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Clizbe,D.B., Owens,M.L., Masuda,K.R., Shackelford,J.E. and
            Krisans,S.K.
  TITLE     IDI2, a second isopentenyl diphosphate isomerase in mammals
  JOURNAL   J Biol Chem 282 (9), 6668-6676 (2007)
   PUBMED   17202134
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Oct 25, 2022 this sequence version replaced NM_001192008.1.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN11044071, SAMN16676808
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-52                JAXUCZ010000017.1  66026282-66026333   c
            53-196              JAXUCZ010000017.1  66025490-66025633   c
            197-289             JAXUCZ010000017.1  66024643-66024735   c
            290-420             JAXUCZ010000017.1  66024021-66024151   c
            421-1022            JAXUCZ010000017.1  66022731-66023332   c
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17q12.1"
     gene            1..1022
                     /gene="Idi2"
                     /gene_synonym="RGD1559783; RGD1562352"
                     /note="isopentenyl-diphosphate delta isomerase 2"
                     /db_xref="GeneID:502143"
                     /db_xref="RGD:1559783"
     exon            1..52
                     /gene="Idi2"
                     /gene_synonym="RGD1559783; RGD1562352"
                     /inference="alignment:Splign:2.1.0"
     exon            53..196
                     /gene="Idi2"
                     /gene_synonym="RGD1559783; RGD1562352"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..738
                     /gene="Idi2"
                     /gene_synonym="RGD1559783; RGD1562352"
                     /EC_number="5.3.3.2"
                     /codon_start=1
                     /product="isopentenyl-diphosphate delta isomerase 2"
                     /protein_id="NP_001178937.1"
                     /db_xref="GeneID:502143"
                     /db_xref="RGD:1559783"
                     /translation="MFQASKTHLNELQIKRLEEILIVIDKQDQIIGADTKRNCHLMEN
                     INKGLLHRGFSVVLFNTQNQLLVQQRADAKYTFPGHFTDSCSSHPLYVPEELEEEDAL
                     GVRRAALRRLQAELGIPQDQISIKDITFMTRKYQKCQSDAVWGDHEIGYLLLVRKDLT
                     LNPDPREVRSYSYMSQEDVQELLDREARGAEKITPWFRSMVEDFLLPWWPYLEDVSPF
                     VEPDKIYGL"
     exon            197..289
                     /gene="Idi2"
                     /gene_synonym="RGD1559783; RGD1562352"
                     /inference="alignment:Splign:2.1.0"
     exon            290..420
                     /gene="Idi2"
                     /gene_synonym="RGD1559783; RGD1562352"
                     /inference="alignment:Splign:2.1.0"
     exon            421..1022
                     /gene="Idi2"
                     /gene_synonym="RGD1559783; RGD1562352"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tctccattca tcctgggttt cagaggccgc acaagaccca acttcagaga aggtatgttc
       61 caggcaagca aaacccacct gaatgaactc cagataaaac gcctggagga gatcctcatt
      121 gtcattgaca agcaggacca gatcattggg gccgacacca agaggaactg ccacctgatg
      181 gaaaacatta acaagggcct gctacaccga ggcttcagtg tggtcctctt caacacacaa
      241 aaccagctct tggttcagca gagagcagat gccaagtaca cttttcctgg acattttaca
      301 gattcctgtt ctagtcaccc tttatatgtg cctgaggagc tggaagagga ggatgccctg
      361 ggagtgagga gggcagccct gagacgtctg caggctgaac tgggcatccc ccaggaccag
      421 atttccataa aggacataac cttcatgacc cgaaaatacc aaaagtgtca gtcagatgcc
      481 gtctggggag accatgagat tggctatctt ctgttggtga ggaaggacct tacgctgaac
      541 ccagatccca gggaagtgag aagctacagc tatatgagcc aggaggatgt gcaggagcta
      601 ctggacaggg aggcccgtgg ggcagagaag atcaccccat ggttcagaag catggtagaa
      661 gacttcctgt tgccttggtg gccttattta gaggatgtgt ccccatttgt ggagcctgac
      721 aagatatatg gactttgagg ggtgtagaaa agtaatggtt gaagcaggga ttgggtgtgg
      781 gaaatgacag cagctaagag tacttgctcc tgttcactct tatgacctct gtgggtacct
      841 ggaatgaact atgtggtata catacagatc aaggcaaaga cctcgtgtgc ataaaattat
      901 aaaatgtctc aaaaacaaag ttctttaata acccatgggt aaaactggca tgtatgacag
      961 aaccttgagt tctaatttcc tttaattgct tgcactaaat aaaattcaag ctcttcattt
     1021 ca
//
