LOCUS       XM_017601875            2133 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus inducible T-cell co-stimulator ligand
            (Icoslg), transcript variant X4, mRNA.
ACCESSION   XM_017601875
VERSION     XM_017601875.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017601875.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2133
                     /gene="Icoslg"
                     /note="inducible T-cell co-stimulator ligand; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 19 ESTs, 5 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     128 samples with support for all annotated introns"
                     /db_xref="GeneID:499415"
                     /db_xref="RGD:1562791"
     CDS             206..1126
                     /gene="Icoslg"
                     /codon_start=1
                     /product="ICOS ligand isoform X4"
                     /protein_id="XP_017457364.1"
                     /db_xref="GeneID:499415"
                     /db_xref="RGD:1562791"
                     /translation="MQLKFFSGPGLFLLLFCSLCVEAEVKEVNAMVGSDVELRCVYPR
                     RSHFSLDDLYVYWQIVDEAKTVVTYYLPSANESSTIHVSNSYKNRAHLSPDLMKEGDF
                     SLHLQNVTPQDTQEFKCLVFRMSTVLGKALEEVVRLRVAANFSTPVISTSGSSDPGQE
                     RTFTCMSKNGYPEPNLYWINRTDNTLIDETLQNNTVYLNELGLYDVVSTLRIPWTPHV
                     DVICCVENVALHQNITSISRAGEVQAGEAQAGEAQAGEAQAGEAQAGEAQAGEAQAGE
                     AQAGEAQAGGAQAGEAQAGEAQAGKAQVSA"
ORIGIN      
        1 ttgtgcccaa ttggccaggc gcgcagcgct tgcgagcgca gttacagcct gtctcctgcc
       61 ggcgaagcct caacaacccc agatttccgc gccccaaatc cttgaagccc cccaaattct
      121 ccgtgggctc cgaggacttc ggaaccccag cagctgcagc tctccactct ccgaggtcca
      181 gcaccccgaa gtctgctctc gcactatgca gctaaagttc ttttccggtc ctggtctgtt
      241 tttgctgcta ttttgcagtc tctgtgtcga ggctgaagtt aaagaagtca atgcaatggt
      301 ggggagcgat gtggagctcc gctgcgttta tcctcggaga agccatttca gcttggatga
      361 tctgtatgtc tactggcaaa tcgtcgatga agctaaaact gtggtgacgt attacctgcc
      421 cagtgctaac gagtcttcga caatccatgt gagcaactcc tacaagaaca gggcccatct
      481 gtcaccggac ctcatgaagg agggcgactt ctccctgcac ctgcagaatg tcacccctca
      541 ggatacccag gagttcaagt gcttggtctt taggatgtcc acagtgttag gcaaggcctt
      601 ggaagaggtg gtcagactgc gtgtggcagc aaacttcagt acgcctgtca tcagcacctc
      661 tggcagctct gaccctggcc aggaacgcac cttcacttgc atgtccaaga atggctaccc
      721 agagcccaac ctgtattgga tcaacaggac ggacaatacc ctaatagacg agactctgca
      781 gaataacacg gtctacttga acgagttggg cctgtatgac gtcgtcagca cactgaggat
      841 cccttggaca ccccatgtgg atgttatctg ctgtgtagag aatgtggctc tccaccagaa
      901 cattactagt atcagccggg caggtgaggt ccaggcaggt gaagcccagg caggtgaagc
      961 ccaggcaggt gaggcccagg caggtgaagc ccaggcaggt gaagcccagg caggtgaggc
     1021 ccaggcaggt gaagcccagg caggtgaagc ccaggcaggt ggggcccagg caggtgaggc
     1081 ccaggcaggt gaagcccagg caggtaaagc ccaggtcagt gcctagggac tctgggagcc
     1141 tccaggtcat aggttaggcg aggtccacag tgataaacag acttcttaca gatgatttct
     1201 atcagagaga ggcaatgggg gaggttcttg gtttctgaag gtggggacag agattgccgc
     1261 tcgggcctct cacaagaact tttactcact gtccaggcaa gcaattagtg tgcctgtcac
     1321 ctacagcagc tgattcttga gctcttcagc cagtgaggaa cactgagtca gtgagtcgta
     1381 gcagcaacag gacttggtca ggagggagga ctataccggg acacttcccc acattctctg
     1441 cctttgaaca cgtgcccccc ccaaccccac ccccatccca tcccatccca tcccatccca
     1501 tcccagggaa ttcagctggc cttggctact ggctgggtcc tctatggatc accaagacct
     1561 gaccttcccc agaggccata gctgtcttag cctagataag ggaccaagcc agtcactgga
     1621 tatgaagaat gatcgtatta ataagaggtg tcccaaatag gtgacccgca gagggagaag
     1681 gctggcaaga ggaggccaga agctggagtg aggtggggtg aggactagtt gtcttctttt
     1741 ggggtcagta atggtactgg cattcttagt gggcaccagt acgttgtaga aacatccaag
     1801 agcgtcaccc ccagaagagt ccatatttct ttcatgcccc tcccttttga gcctgaagac
     1861 agtgacacca agtcttatag taggaccagg ggacctttga agagtaccca gagattttac
     1921 aactcacaca gtgataacag gaagcctttt gaaagctgct gaccctttct ttccatgggg
     1981 aaaacttctc cctatcaagg cccttaagtc tcgaacattt tcccttttct tttctttttt
     2041 ttgggggggg gggttgggtt gacaggattt ctctgtggac caagctggcc tctgcctccc
     2101 cagcgctgaa attaaaagca tctgccacta cca
//
