LOCUS       NM_001108827            2338 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus iron-sulfur cluster assembly factor IBA57
            (Iba57), mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001108827 XM_001076900 XM_343905
VERSION     NM_001108827.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Maio N and Rouault TA.
  TITLE     Iron-sulfur cluster biogenesis in mammalian cells: New insights
            into the molecular mechanisms of cluster delivery
  JOURNAL   Biochim Biophys Acta 1853 (6), 1493-1512 (2015)
   PUBMED   25245479
  REMARK    Review article
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_343905.3, XM_001076900.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BP500202.1, SRR8487227.194829.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..2338
                     /gene="Iba57"
                     /gene_synonym="RGD1306000"
                     /note="iron-sulfur cluster assembly factor IBA57"
                     /db_xref="GeneID:363611"
                     /db_xref="RGD:1306000"
     exon            1..389
                     /gene="Iba57"
                     /gene_synonym="RGD1306000"
                     /inference="alignment:Splign:2.1.0"
     CDS             49..1125
                     /gene="Iba57"
                     /gene_synonym="RGD1306000"
                     /note="putative transferase CAF17 homolog, mitochondrial;
                     IBA57, iron-sulfur cluster assembly homolog; IBA57
                     iron-sulfur cluster assembly; IBA57 homolog, iron-sulfur
                     cluster assembly"
                     /codon_start=1
                     /product="putative transferase CAF17, mitochondrial"
                     /protein_id="NP_001102297.1"
                     /db_xref="GeneID:363611"
                     /db_xref="RGD:1306000"
                     /translation="MAAVALLRGAAAGRKSPAWQWRPSGTTRHCPVRGSGLFRGNSTD
                     SVAWTCFRLDGRALMRVRGPDASPFLLGLLTNELPLSGPPAGATQPSARAAYAHFLNV
                     QGRTLYDVIVYGLPECTEEAPGFLLECDSSVLGTLQKYLTMYKIRRKVAVEPHPELHV
                     WAVLPCAPQTSEAAPLEERVEATTMLIRDPRTARMGWRLLTQDGGPAVVPRGQLGDLQ
                     DYHIYRYQQGIPEGVCDLPPGMALPLESNLVFMNGVSFTKGCYIGQELTARTHHTGVI
                     RKRLFPVKLEGPLPASGISPGTLVTVTATGQAAGKFRAGQGHIGLALLRSETIKGPLH
                     IKTSESQLVAVTAMVPDWWPTAAK"
     exon            390..730
                     /gene="Iba57"
                     /gene_synonym="RGD1306000"
                     /inference="alignment:Splign:2.1.0"
     exon            731..2338
                     /gene="Iba57"
                     /gene_synonym="RGD1306000"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccgccgcc gggggcagct gtggtgcccg ccttcactag cgcccaagat ggcagcggtg
       61 gcgctgcttc ggggagcggc tgcggggcgc aaaagcccgg catggcagtg gcggccgagc
      121 gggaccacga gacactgccc agtccgtggt tccggccttt tccgcggcaa ctccacggat
      181 agtgtagcct ggacttgctt ccggctggat gggcgcgcct taatgcgcgt gcgcggcccg
      241 gacgcttcac ccttcctgtt gggactattg accaatgagc tgccgctttc ggggcctccg
      301 gccggcgcga ctcagccctc tgcgcgtgcg gcctatgccc atttcctaaa tgtgcagggg
      361 cgcacgctct atgacgtcat tgtgtatgga ctcccagagt gtaccgagga ggcaccaggc
      421 ttcctcctcg agtgtgacag ctctgtgctg ggcaccctac agaagtacct caccatgtac
      481 aagatccggc ggaaggtcgc cgtggagcca cacccggagc tccacgtgtg ggctgtgcta
      541 ccttgtgccc cccaaacctc tgaggctgca cctctagaag agagggtaga agccaccacc
      601 atgcttatcc gtgacccccg gactgcacgt atggggtggc ggcttctcac tcaggatggt
      661 ggcccagctg tggtgcccag gggacagctt ggggacctcc aagattatca catataccgg
      721 taccagcaag gcatccctga gggagtctgt gatcttcccc cagggatggc cctacccctg
      781 gagtccaacc tggtcttcat gaatggcgtg agcttcacta agggctgcta cattgggcag
      841 gagctgacgg cccgaaccca ccacacaggt gtcattcgaa agcgcctctt ccctgtgaag
      901 cttgaaggcc cccttcctgc cagtggcatc agtcctggca ccttagtgac ggtgactgca
      961 acaggccagg cagcgggcaa gttcagggct ggccagggac acataggact ggctttgctg
     1021 cggtcagaga caatcaaggg tcctctccac atcaagacct cggagagcca actggtggct
     1081 gtgactgcca tggtgccaga ctggtggccc acagctgcca agtagctgga tgctctggag
     1141 ctccactggc cttagagtta ccagatgcct tcgagccctg cccaaggtca tcttctctgt
     1201 gtgctgtgcc atgttgggtg tgagttcctc ctcctgtggt ggcctcctgg agcacaccca
     1261 cgaggaaagt tccgtgtgtt ccaggctagg gattggccga tgcttcctag agggtcccac
     1321 tcttgtgggc cgtcctctct cgagaagtct aactgagagc agagtgacca cctgatgctg
     1381 ggagagggac ggggctgagc tcctgtttgg accagatttc agaacgagac ttgatacagt
     1441 ccacacgcca aggtcgtggc ctcgaggatg aggcctatgt tgggcgccag gtccctaacc
     1501 ttgtttcccc ttggaggaag ggactctgtg tgcctgcaag gttcctgggc cgggcttgtg
     1561 ttctcttgaa attcatctca gggcatagat tgtataagtt ctgtgcaggg ttgggaggtt
     1621 ggatcccttg gattgggaga tgtgttctgt gagctgcagg gactacatgt ttactgtccc
     1681 aagagctctt tcgttcctca aagtgagctg ctgtcttttg gtattcccct ggaagctcta
     1741 ggagggttgg agcccagggc tcaggtccat ctgggagtgg cttctgctca gctaaccttt
     1801 ttgctgggtt gggatatcac gatgctttta gtagggagtg acttgctggc cactggtggg
     1861 gtggcctccc tctgaaccac tttctaacct ttgtaatgtg aagtgggggt ctctccacaa
     1921 aacccaagga ctagtaaagt gtggtgtgca aacagccctc ttggaactct tgtttcattt
     1981 cgggcaggtc tggtagagca gaccatgaga cagctgtccc tggagccaac caccagatgg
     2041 aagaattcca ctactgcagc tgtgtatccc tggttggtct tgagcttgaa attctcctgc
     2101 ctcagcttca tgagtgctag gttgataggc atgcaccact gtgttcacag aagatgtgtt
     2161 ttgttttatg tttatgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
     2221 tggatgtctg ggtgcctata aagaacaaaa ggagggtatc acgtaccctg gagttggact
     2281 tacaggtggc tctgagctgc tggatatgca caatgggaaa caaacttgtg tcccctgc
//
