LOCUS       NM_001024320            2601 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus hyaluronoglucosaminidase 6 (Hyal6), mRNA.
ACCESSION   NM_001024320 XM_575407
VERSION     NM_001024320.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC082016.1.
            
            On May 27, 2005 this sequence version replaced XM_575407.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082016.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q22"
     gene            1..2601
                     /gene="Hyal6"
                     /note="hyaluronoglucosaminidase 6"
                     /db_xref="GeneID:500051"
                     /db_xref="RGD:1564219"
     exon            1..287
                     /gene="Hyal6"
                     /inference="alignment:Splign:2.1.0"
     exon            288..1239
                     /gene="Hyal6"
                     /inference="alignment:Splign:2.1.0"
     CDS             319..1764
                     /gene="Hyal6"
                     /EC_number="3.2.1.35"
                     /codon_start=1
                     /product="hyaluronoglucosaminidase 6 precursor"
                     /protein_id="NP_001019491.1"
                     /db_xref="GeneID:500051"
                     /db_xref="RGD:1564219"
                     /translation="MCSQWVAQLGELVLLVLVTQAALKPAMPPVIKNQPFNIFWAAPT
                     LFCKDNFDVNMNLQAFNIIPNPFETQSGSTIAVFYPKELGYYPYFSEDGISFYGGIPQ
                     NVNLSEHLRKSANDIANAVSLWRSEGLAVIDWEGWRPQWDRNWGGRIIYKNHSLAFTR
                     HHHPDWAETKVRTVAQQEFENAGKSLMNVTLTLALEMRPKRLWGFYLYPDCYNYDYRI
                     NPEFYTGSCPDDEIFRNDQLMWLWEKSAALYPSIYLSKILKSDINALKFVHFRVREAL
                     RIAEKARKDYALPVFIFSRPFYLQSIEALSEEDLVHTIGESAALGAAGIILWGGYEYS
                     DTKETCLSLQQTVHGLLGPYALNVTSAAKLCSQSLCNSHGRCIRKTPDSSFYLHMPED
                     SQKNSVTSKGVNFVISPKSKLKAIVNMKNGFVCHCYYGWHGESCRSHSPNLQKNKVPA
                     TGFNLAVSVGMALFVILMNFFLFPTTMVIFL"
     exon            1240..1329
                     /gene="Hyal6"
                     /inference="alignment:Splign:2.1.0"
     exon            1330..2577
                     /gene="Hyal6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgagattctt tggcagtttt tggttttaac tgactgtgtg tgtgactaaa aggctgaatt
       61 ttgtttgcaa tttagctgct gagaatatgg cccaattctt tcatagaaga atagtggtct
      121 taaggaaata atacttttta aatgttcatt tttgtgccca agaaaggatg ttagcgaact
      181 ctacaatcaa caacagatga ttgatggcat ctctagtttc tgtgtcaccc tatgctattc
      241 ctgtgggaac tcttctgtgt ttggaaacaa tcaaataaac ctttgagtac acttgtgtca
      301 tgctgaaaac aacaatccat gtgtagccag tgggtggcgc agcttggtga actggtgctc
      361 ttggttctgg tgactcaagc cgctctcaaa ccagcaatgc ctcccgtgat caagaaccaa
      421 cctttcaaca ttttctgggc tgcccctact ttgttttgta aagataactt cgatgtaaat
      481 atgaatcttc aagcgttcaa catcattccc aatccctttg aaacccagag tggatccact
      541 attgctgtat tttatccaaa ggaactggga tattatcctt atttctctga agatggaata
      601 tccttctacg gtggaatacc tcagaatgtg aacctctctg agcacctcag gaaaagcgcc
      661 aatgacattg cgaatgctgt ctctttgtgg cgatcagaag gacttgctgt tattgactgg
      721 gaaggctgga ggccccagtg ggataggaat tggggcggca gaataatata taaaaaccac
      781 tcgctagcct tcactcgcca ccatcatcct gactgggccg aaacgaaagt gagaacagtt
      841 gctcagcaag aatttgaaaa tgctggaaaa agtttaatga acgtcactct cacgttggcg
      901 ttagaaatga gaccaaagcg tttatggggc ttctatctct atccagattg ctacaattat
      961 gattaccgga taaatccaga gttctacaca ggtagctgcc cagacgatga aattttccgc
     1021 aatgaccagc tcatgtggtt gtgggaaaag agtgcagcac tttatccttc catatatttg
     1081 agtaaaatat taaaatcaga cataaatgca ctgaaatttg ttcattttcg agtgagagaa
     1141 gccctgagaa ttgctgaaaa ggctaggaag gactatgctt tgccagtttt tattttttcc
     1201 agaccatttt atttgcaaag tattgaagct ttgtcagagg aggacttagt gcacacaatt
     1261 ggtgaaagtg ctgcattggg agcagcagga ataatattgt ggggaggata tgaatattct
     1321 gatacaaagg agacttgctt atctttgcaa caaactgttc atgggctatt gggcccctat
     1381 gctctcaatg taacatcagc agcaaagctc tgtagtcaaa gtctatgtaa cagccatgga
     1441 agatgtattc ggaagacccc cgactcctcc ttttatctgc atatgcctga agatagccaa
     1501 aagaattctg tcacgagcaa aggtgtcaat tttgtcattt ctccaaaaag taaactgaag
     1561 gcaatagtga atatgaagaa tggatttgtg tgtcactgtt actatggctg gcacggagag
     1621 tcctgcagat ctcactctcc aaatctccaa aagaacaagg ttcctgcaac tggatttaat
     1681 ttagcagttt ctgttggcat ggccttattt gtgattctga tgaatttttt cctattccct
     1741 actacaatgg taatttttct gtaaaacacc gaagagaaga aaacattatc tttctctgat
     1801 tgcaagcctt ttctaaagaa cttttagttt taagtttcat acacattgtt ggttgctcag
     1861 ttcatggtgg gtaattggaa ttctaatctc atggagatta gaagttaagg ataaacagac
     1921 acgtatgatg gtgatagtag tctatagaat taagaggaaa caggtttaag gcattaggag
     1981 gtattagaaa gcactggaaa ttttataaaa gattatcaca taaggccttt gtagtgagaa
     2041 atcagggagc agatgaatta agtcaacact atcagggaga cagatattag agttttctcc
     2101 tataatatga gcacctggaa ggcagagata gatgacaagt tcaaggccag cttagctgac
     2161 aaagtgagct caagtcagtc aagacaacat agtgagagtt tgtctggggg gcatggttgg
     2221 ggggataagg aactagaaac aaaataggaa agatccaaaa gaatgtatct gggaaataaa
     2281 aaaaaaagag caaatccaga ggaaaggact ctgcattcca gggattgtga acttttaaat
     2341 cacaacaata acaaaaacaa cagcaccaac aagaaggaca ccaataggat cgtcacctat
     2401 ggagatgaaa atgactcttt aaatggtctc atcaaggatt aactttatcc agagttcatt
     2461 tgtctcatca atatcaaaag ataaacttta ctagctttct acacaattga atttgtgtca
     2521 gaaattcttt tgttcagtac tttttggttt attgaaatac actctaacca aacagccaaa
     2581 aaaaaaaaaa aaaaaaaaaa a
//
