LOCUS       XM_017598518            1335 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hydrogen voltage-gated channel 1
            (Hvcn1), transcript variant X2, mRNA.
ACCESSION   XM_017598518
VERSION     XM_017598518.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017598518.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017598518.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1335
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1335
                     /gene="Hvcn1"
                     /note="hydrogen voltage-gated channel 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 113
                     samples with support for all annotated introns"
                     /db_xref="GeneID:304485"
                     /db_xref="RGD:1310788"
     CDS             442..1263
                     /gene="Hvcn1"
                     /codon_start=1
                     /product="voltage-gated hydrogen channel 1"
                     /protein_id="XP_017454007.1"
                     /db_xref="GeneID:304485"
                     /db_xref="RGD:1310788"
                     /translation="MTSHDQKAVTRRTKVAPTKRMSRFLKHFTVVGDDYHTWNVNYKK
                     WENEEDEEEPAPTSAEGEGSAVGPDAEAGSASTPRPSLDFRSRLRKLFSSHRFQVIII
                     CLVVLDALLVLAELLLDLRIIEPDLSVKKYSTKVFHYLSLAILAFFVLEISLKVFVFR
                     LEFFHHKFEILDAIVVVVSFVLDLILLFKNHHFEALGLLILLRLWRVARIINGIIISV
                     KTRSERQILRLKQINLQLATKIQHLEFSCSEKEQEIERLSKLLRQNGLLEDVNVN"
ORIGIN      
        1 agtggcatct tgccctgagg gctgccacga tctgctccgc accctgcaca cccgccagca
       61 gcggggtcac ggagggagga aggaagccct ggccaccctc catcctcgtg attccccgct
      121 gttcctttgt ccattctggc ttgcagggag gggaggacca ggccagggga tactgtgggg
      181 gtgaccaagg ccctggctgc ttcttgaact gtggctaccc actccgctgt cctccccctg
      241 gggaactgag cattgacaag cgcctcctct cccggtggag agagccagcc gctccaaagg
      301 agacagaagt agaactacta gcagttttag gcgctgctca aagggacctg tgaggacaga
      361 ttgccaagtg tccaactcag gacagcggcg tgacaagtct gctttcgggg tactctcgct
      421 ggatcctgag acaacaggaa aatgacttcc catgaccaaa aggccgtcac tcgcagaacc
      481 aaggtggctc ccaccaagag gatgagcagg ttcttgaagc acttcacagt ggtgggggac
      541 gactaccaca cctggaatgt caactacaag aagtgggaga acgaggagga tgaggaggag
      601 cccgccccca cgtctgcgga gggcgagggc agtgctgtgg gcccagacgc tgaggctggc
      661 tctgcctcca cacccaggcc atccctggac ttcaggagcc ggctaaggaa actcttcagt
      721 tcccacaggt ttcaggtcat catcatctgc ctggtggtcc tggacgccct cctggtgctg
      781 gctgagctcc ttctggattt gaggatcatt gagccggatc tttcggtcaa gaagtattcc
      841 acgaaggtat tccactatct gagtttagcc atcctggcct tcttcgtgct ggagatctcc
      901 cttaaagtct ttgtcttccg cttggagttc ttccaccaca agtttgagat cctggatgcc
      961 attgtggtgg tggtgtcctt tgtccttgac ctcatcctcc tgtttaaaaa ccaccatttt
     1021 gaagctcttg gtctgctgat tctgcttcgg ctctggaggg tggcccggat catcaacggt
     1081 atcatcatct cagtgaagac acgctctgaa cggcagatct tacggttaaa gcagataaac
     1141 ctccaactgg ccaccaagat ccagcatctg gaattcagct gctccgagaa ggaacaagaa
     1201 attgagcgac tgagcaagct gttgagacag aacggacttc ttgaggacgt gaacgtgaac
     1261 taagccttcc agaagctcca tccagagctg ggctgtgtcc agagagcaac tgtgtggttt
     1321 gaggtccagt cccca
//
