LOCUS       NM_001106263            1263 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus HIV-1 Tat interactive protein 2 (Htatip2), mRNA.
ACCESSION   NM_001106263 XM_001080298 XM_214927
VERSION     NM_001106263.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 1263)
  AUTHORS   Dong,W., Shen,R. and Cheng,S.
  TITLE     Reduction of TIP30 in esophageal squamous cell carcinoma cells
            involves promoter methylation and microRNA-10b
  JOURNAL   Biochem Biophys Res Commun 453 (4), 772-777 (2014)
   PUBMED   25312779
  REMARK    GeneRIF: These results suggest that TIP30 expression is regulated
            by promoter methylation and miR-10b in ESCC.
REFERENCE   3  (bases 1 to 1263)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   4  (bases 1 to 1263)
  AUTHORS   King,F.W. and Shtivelman,E.
  TITLE     Inhibition of nuclear import by the proapoptotic protein CC3
  JOURNAL   Mol Cell Biol 24 (16), 7091-7101 (2004)
   PUBMED   15282309
REFERENCE   5  (bases 1 to 1263)
  AUTHORS   NicAmhlaoibh,R. and Shtivelman,E.
  TITLE     Metastasis suppressor CC3 inhibits angiogenic properties of tumor
            cells in vitro
  JOURNAL   Oncogene 20 (2), 270-275 (2001)
   PUBMED   11313954
REFERENCE   6  (bases 1 to 1263)
  AUTHORS   Xiao,H., Palhan,V., Yang,Y. and Roeder,R.G.
  TITLE     TIP30 has an intrinsic kinase activity required for up-regulation
            of a subset of apoptotic genes
  JOURNAL   EMBO J 19 (5), 956-963 (2000)
   PUBMED   10698937
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC158803.1.
            
            On Jan 27, 2008 this sequence version replaced NM_001106263.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158803.1, CV076205.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..1263
                     /gene="Htatip2"
                     /note="HIV-1 Tat interactive protein 2"
                     /db_xref="GeneID:292935"
                     /db_xref="RGD:1309941"
     exon            1..206
                     /gene="Htatip2"
                     /inference="alignment:Splign:2.1.0"
     CDS             12..740
                     /gene="Htatip2"
                     /note="HIV-1 tat interactive protein 2, homolog"
                     /codon_start=1
                     /product="oxidoreductase HTATIP2"
                     /protein_id="NP_001099733.1"
                     /db_xref="GeneID:292935"
                     /db_xref="RGD:1309941"
                     /translation="MADKETLLKLREDFKMQNKSVFILGASGETGKVLLKEILGQNLF
                     SKVTLIGRRKLTFEEEAYNNVNQEVVDFEKLDEYAPAFQGHDVGFCCLGTTRRKAGAD
                     GFVRVDRDYVLKSAELAKAGGCKHFNLLSSRGADKSSSFLYLQVKGEVEAKVEELKFD
                     RLSVFRPGVLLCDRQESRPGEWLARKFFGSLPDSWASGYAVPVVTVVRAMLNNLVSPG
                     SGQMELLENKAILHLGKDSDGPKL"
     exon            207..314
                     /gene="Htatip2"
                     /inference="alignment:Splign:2.1.0"
     exon            315..452
                     /gene="Htatip2"
                     /inference="alignment:Splign:2.1.0"
     exon            453..514
                     /gene="Htatip2"
                     /inference="alignment:Splign:2.1.0"
     exon            515..1233
                     /gene="Htatip2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtttccccag catggcggac aaggaaacac tgctgaagct tcgggaagac ttcaagatgc
       61 agaataaatc cgtctttatt ttgggcgcca gcggtgaaac cggaaaagta cttttaaaag
      121 aaatcctggg acagaaccta ttttccaaag taacgctcat tggtcggagg aagctcacat
      181 ttgaggagga agcttataac aatgtgaatc aagaggtggt ggatttcgaa aagctggatg
      241 agtacgcccc tgcctttcaa ggtcacgatg ttggattctg ctgcctgggc accaccagga
      301 gaaaagctgg agcggatgga tttgtccgtg tcgaccgaga ttatgtgctg aagtctgcag
      361 agctggcgaa agcaggaggg tgcaaacatt tcaacttgct gtcctccagg ggggctgata
      421 agtccagcag tttcttatac ttacaagtaa agggagaagt ggaagccaag gttgaagaat
      481 taaagtttga tcgattgtca gtgttccggc caggagtcct gctgtgtgac aggcaagagt
      541 ctcgtccagg cgaatggcta gctaggaaat tcttcggctc tttgccagac tcttgggcca
      601 gcgggtacgc tgtgcctgtg gtgacggtgg ttagagcgat gctgaacaac ctggtgagtc
      661 ccggcagtgg acaaatggaa cttctggaaa ataaggccat cctccacctg gggaaagaca
      721 gcgacggacc caaactgtga ccatgccgga ggacgttcgt gaaaacctca gtgcctgtca
      781 ccaaatcagt catttggggc tctataaaaa gtctctttgt ggtccttggt ggtatccctc
      841 tcctcagaca tgcagctcca tcaggaaatg gcagtgctcc acatcagttg ttgagagtcc
      901 cgttgttcat gtaagtcacc caggaagctt ctggggaaca ggtttatatc acatgcctat
      961 actttgtaga ttgcaaacag ggatctccgg aggtgcggtg cctctggttg taagaccagc
     1021 tttgaagcac tcctacagag ccatctgagc agaggggccc tggcactcca ggcaggcgag
     1081 cgatgctcaa gcttgttacc agtctggtct cctagtggca cagtgctgat ggtgcatgta
     1141 gctgagtgaa cactgtgcct tgactctgtg tcaacacaga ggctgtaaaa caagcttctg
     1201 taattctctg aggaataaaa ataaatggag aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1261 aaa
//
