LOCUS       XM_003752067            2657 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus heat shock transcription factor 3
            (Hsf3), mRNA.
ACCESSION   XM_003752067
VERSION     XM_003752067.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003752067.6.
            
            On Jan 21, 2021 this sequence version replaced XM_003752067.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2657
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2657
                     /gene="Hsf3"
                     /note="heat shock transcription factor 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100360790"
                     /db_xref="RGD:2321468"
     CDS             38..1519
                     /gene="Hsf3"
                     /codon_start=1
                     /product="heat shock factor protein 3-like"
                     /protein_id="XP_003752115.1"
                     /db_xref="GeneID:100360790"
                     /db_xref="RGD:2321468"
                     /translation="MEHFRKTVVPHFLTKLWVLVDDALLDHVIRWSKDGHSFQIVNEE
                     TFAKEVLPKYFKHNKIASFVRQLNMYGFRKVIALQSEKTSLENKITIEFQHPLFKKGE
                     AFLLANIKRKVPTIKTEDANLCSDEYQKIMAEIQEFKDMQKNMDTRYAQMKQDYSNLC
                     LEVTNLRKKYCEQQQLLTQVLHFILNLMSENHTVLKKRKRSLSFISEASDSELDHQYL
                     HIPDDKKKEAMEILKDGYELIEDKYKSLLDRVLPILKEPKSLISSADQPSGDDGEHAE
                     VSVQDKPTDEESLTIQLDLTIPVLPEQITQESVEQEPKDISLELDLSSQDSPLMKDDS
                     DNLYNNIINRDKMNVNHTEGNLLELNSILSWKGVDYDSDHFSESLNLMQNEEEKSPLD
                     PNGGKDKHMVQCMEKPELFLLDGTPICDFGENLQDYDILLDDLKDPPNVISALCDHDY
                     VTSNISTLQEDNIENDAPPFCMEANGESSVFPFLFLNPVSNIF"
ORIGIN      
        1 ggactgacat tttcttgagg cattgacacc ctaaaacatg gagcacttcc gcaagacagt
       61 ggttcctcac tttctcacta aactctgggt gttagtagac gacgctctct tggaccatgt
      121 gattcgctgg agcaaggatg gtcacagctt tcagattgtg aatgaagaga cctttgccaa
      181 agaagtacta ccaaaatact tcaaacataa caaaatagca agctttgttc gacagctcaa
      241 catgtatggt ttccgaaaag ttattgcact gcagagtgaa aagactagcc tggagaataa
      301 aataactatt gaatttcagc atccactttt caaaaaggga gaagccttcc ttcttgcaaa
      361 cattaagcga aaggtgccaa cgataaaaac tgaagatgcc aacctctgct ctgatgagta
      421 tcagaaaatt atggctgaaa tacaagagtt caaagacatg cagaagaaca tggataccag
      481 atatgcacaa atgaaacaag actattccaa tctatgtctt gaagttacaa acctaagaaa
      541 gaagtactgt gagcaacaac aactgttgac acaggtactc cattttatct tgaatttgat
      601 gagtgaaaac catacagtac taaaaaagag gaaaaggtca ttatcattca tatctgaagc
      661 ctcagattct gaattggatc atcagtatct ccatattcca gacgacaaga aaaaggaagc
      721 tatggagata ttaaaagatg gttatgaact tattgaagac aaatataaaa gtctccttga
      781 tagagtctta ccaattttaa aagaacccaa aagtttaatt tcatctgcag accagccaag
      841 tggggatgat ggagaacacg ctgaagtgtc cgttcaggat aaacctacag atgaagagtc
      901 gctgaccatt cagttggatt tgaccatacc agttttacca gaacaaataa ctcaagaatc
      961 cgttgaacaa gaacctaagg atatttcttt ggaattagat ctttcttccc aggattcacc
     1021 tttgatgaaa gatgactcag acaatctgta taacaatata attaacaggg ataaaatgaa
     1081 tgtgaatcat actgaaggaa atttgttaga gctaaattcg atactatctt ggaagggagt
     1141 ggattatgat tctgatcatt tcagtgagag tctaaatctg atgcaaaatg aagaagagaa
     1201 aagtccgctt gatcccaatg ggggaaaaga caaacatatg gtacaatgca tggaaaaacc
     1261 agagcttttc cttttggatg ggacaccaat atgtgacttt ggagaaaatc ttcaagatta
     1321 tgacatactt ttggatgatc tgaaggaccc cccaaatgtc atatcagctt tgtgcgacca
     1381 tgattatgta acctccaata tttccactct gcaagaagat aatattgaaa atgatgctcc
     1441 cccattttgt atggaagcca atggggaatc cagtgtgttc ccttttctct ttcttaaccc
     1501 tgttagtaat attttttgaa aagcatatcg aaaccaatct tctgttacaa tttattttaa
     1561 gtctcagtga atcgcatttc ctctggggaa acagatattc catggctgct tgctagtgta
     1621 tgcatcttca tttggaaata tctgtaactt aaagactgtg ttcaaattac atcctcccag
     1681 tatctaggca agttttggca actaggatga aattcagacc acaaaaaaac ataagtaata
     1741 tatccaaatt ttaatataat aagaagttaa ttttttattt ttaaactaat aatattctaa
     1801 taccttattt gttactagaa cagatattaa cgttattgca tttttctaag tagttagaaa
     1861 ttttctgtag ctagaatttg tttatagtaa agaaacaatt gttataggat ttaaatgcaa
     1921 ggtttagagt taatgaaaaa ggtgttaatt ctagatttta tggatatatt tattctatag
     1981 ctttccattt tatatcagta ttacatgatt tttaatgcct aaagaaagtt aaaatctcag
     2041 cagaatattg gtactttttg tataattgcc accttatata caatcaaagt cagcatattg
     2101 actgccatat aaaaccttcg atgagaactc ccaagaatca agctctagca aactttttct
     2161 tttaaagcat gcagaaaacc aagagcaaat gatttatttg aaattaaggt ttaaaattca
     2221 cagtcaacca tttctcaact ataacctcta gtcgtatcag tattctttga cagatacata
     2281 attgtcgaca gaatattatc ttttaaaaat actgtggttt tacctaaacc ttgagtggtt
     2341 ttcatacaaa ctattccaac actaacattc atacatggct aaaccttgag taccatagca
     2401 cttagaatct aaggttctct gtctagttga agaagcactt tagagtatgt ttaaggtttt
     2461 aggttggtaa gctgaatact aaagtatcag gcttcgaaag ggcacagtct gtaacacttt
     2521 attactgctt tatcctacct gttaaatggt ctacaaattc agttggtttt tgcccctttt
     2581 atctttcaaa gtttaacctg ttcttcagta gtctcactaa tgaagtcagc tttaacagga
     2641 agcagaaatt ggtcatt
//
