LOCUS       NM_001127683            2816 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus heat shock transcription factor 2 binding protein
            (Hsf2bp), mRNA.
ACCESSION   NM_001127683 XM_001079257 XM_574729
VERSION     NM_001127683.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Hu,Y.H., Warnatz,H.J., Vanhecke,D., Wagner,F., Fiebitz,A.,
            Thamm,S., Kahlem,P., Lehrach,H., Yaspo,M.L. and Janitz,M.
  TITLE     Cell array-based intracellular localization screening reveals novel
            functional features of human chromosome 21 proteins
  JOURNAL   BMC Genomics 7, 155 (2006)
   PUBMED   16780588
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000020.1.
            
            On or before May 26, 2008 this sequence version replaced
            XM_574729.2, XM_001079257.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.81849.1,
                                           SRR26360186.596978.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-50                JAXUCZ010000020.1  10120894-10120943   c
            51-201              JAXUCZ010000020.1  10119687-10119837   c
            202-305             JAXUCZ010000020.1  10108922-10109025   c
            306-455             JAXUCZ010000020.1  10099397-10099546   c
            456-588             JAXUCZ010000020.1  10097256-10097388   c
            589-706             JAXUCZ010000020.1  10093420-10093537   c
            707-810             JAXUCZ010000020.1  10072999-10073102   c
            811-2115            JAXUCZ010000020.1  10035984-10037288   c
            2116-2816           JAXUCZ010000020.1  10035263-10035963   c
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..2816
                     /gene="Hsf2bp"
                     /gene_synonym="RGD1565879"
                     /note="heat shock transcription factor 2 binding protein"
                     /db_xref="GeneID:499413"
                     /db_xref="RGD:1565879"
     exon            1..50
                     /gene="Hsf2bp"
                     /gene_synonym="RGD1565879"
                     /inference="alignment:Splign:2.1.0"
     CDS             3..1019
                     /gene="Hsf2bp"
                     /gene_synonym="RGD1565879"
                     /codon_start=1
                     /product="heat shock factor 2-binding protein"
                     /protein_id="NP_001121155.1"
                     /db_xref="GeneID:499413"
                     /db_xref="RGD:1565879"
                     /translation="MAAIVGERSGTEEACRHMESKEEFVKVRKKDLERLTTEVMQIRD
                     FLPRILNGELLESFQKLKIVEKNLERKEQELEQLRLDCEHFKARLETALADSGREKKE
                     KLALRQQLNEAKQQLLQQAEYCTQMGAVTCTLLWGVSSSEEVVKAILGGDKALKFFNI
                     TGQTMESFVKSLDGDVKEVDSDENQFVFALAGIVTNVAAVACGREFLVNSSQVLLDTM
                     LQLLGDLKPGQCTKLKVLMLMSLYNVSINSKGLKYISESPGFIPLLWWLLSDPDAEVC
                     LHAVRLIQSVVLEPDVFSKVASELQSSLPLQRILAMSKSRNSHLQSAARELLEDLRAL
                     DCSV"
     exon            51..201
                     /gene="Hsf2bp"
                     /gene_synonym="RGD1565879"
                     /inference="alignment:Splign:2.1.0"
     exon            202..305
                     /gene="Hsf2bp"
                     /gene_synonym="RGD1565879"
                     /inference="alignment:Splign:2.1.0"
     exon            306..455
                     /gene="Hsf2bp"
                     /gene_synonym="RGD1565879"
                     /inference="alignment:Splign:2.1.0"
     exon            456..588
                     /gene="Hsf2bp"
                     /gene_synonym="RGD1565879"
                     /inference="alignment:Splign:2.1.0"
     exon            589..706
                     /gene="Hsf2bp"
                     /gene_synonym="RGD1565879"
                     /inference="alignment:Splign:2.1.0"
     exon            707..810
                     /gene="Hsf2bp"
                     /gene_synonym="RGD1565879"
                     /inference="alignment:Splign:2.1.0"
     exon            811..2816
                     /gene="Hsf2bp"
                     /gene_synonym="RGD1565879"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctatggctgc gatcgtgggc gagcgttccg gtactgagga ggcctgccgg cacatggaat
       61 ctaaggaaga attcgttaaa gtcagaaaga aggacctgga gcggctgacg acggaagtga
      121 tgcaaatccg ggacttctta cccagaatac taaatgggga gttactggaa agcttccaga
      181 agttgaagat tgtagaaaaa aacctggaaa gaaaagaaca agaattagag cagctgagat
      241 tggactgtga acacttcaaa gcccggctag aaactgcact ggcagacagt gggagggaga
      301 agaaggagaa gttggctctt cgacagcagc tgaacgaggc aaagcagcag ctcctgcagc
      361 aggcagagta ctgcacgcaa atgggggctg tcacctgtac cctcctctgg ggcgtttcca
      421 gcagcgagga ggtcgtcaaa gccattctag gaggagacaa agcattgaag tttttcaaca
      481 tcactggtca gactatggag agttttgtga agtcattgga tggggacgtc aaggaggttg
      541 actctgatga aaatcagttt gtctttgctc tggctggaat tgtaacaaat gttgctgctg
      601 ttgcgtgtgg gcgtgaattt ttggtgaatt ccagccaggt gctcttggac accatgttgc
      661 agctgctggg ggacttaaag cctggccagt gcaccaaact caaagttcta atgctgatgt
      721 ccctgtacaa tgtgagcatc aattcaaaag gcttgaaata catcagtgag agtcctggat
      781 ttatcccctt gctgtggtgg cttctgagtg atccagatgc agaagtgtgc cttcatgccg
      841 tgcggctcat ccagtctgtg gttctagaac cagacgtctt ctccaaggtg gcctctgagc
      901 tccagagctc cttgcccctg cagcgcatcc tggccatgtc caagagccgc aactcccacc
      961 tgcagtccgc tgcccgggag ctcctggaag acctccgtgc cctggactgt agtgtttaga
     1021 tgtgcccaac taccggagct tggtgaaagt gccagtggcc tgtcccctcc tgagcttcta
     1081 cctttgtgtt caaaactagt atgtcactta tgtcacgtgt tagagatcac aggccttgag
     1141 gactagagat gagcatgatg ggtaagcatc ctgtgtctcc cttgggagtg cacactggtc
     1201 aggcagctgg ttaattttgc cagagcagtg accccaaaaa ggttgtattc tccagaaagg
     1261 tcacctcaga acacttggct actctgagtt ttcgcagagt agcgtcctgc tgccctggag
     1321 gctgcctgcg cgtggagttg gaccaccacc tcccatgtgg tctgtgttcc agcagcattt
     1381 ctgtgatggc ccaccccctt ctctggtaac catgacccca ctgcacaggt tacctttgta
     1441 accttttatg acctgttact tcacatgcaa tggacagttg atctctgtct ccgtgctttt
     1501 atttttgaat aaagttgagt cagtatcagt ttctgaatat aatcttgggg ttaggaagtt
     1561 ggtgtccttt gtccattgtt atttgtttag gaaaacacac tttccttatt ttgttctggc
     1621 ctcttgacta tgaacttaaa gcaagtatgg ggaatggctt caagatgagc agtaggaggt
     1681 cacattccat gacgtggtca cccatctgcc tacgcgtgcg taggctgctc tgtctgtctg
     1741 tgcagccatt cgactgccta gcttctgttc taagaaactg gcagaggaca aaagaaagca
     1801 tgctgcccct gtcacaggtg gtgagctgtg cgagagattc ccacagaagc ctctggcagg
     1861 acaggatact gcagggcatt gagctggggc atcctgtaag gaggaagtgt gtgtcccctt
     1921 gcaatggcgg cttcagcaca cacgttgagc tgctttcctg tgtgtggtgc tgtagagtga
     1981 cttcattttc ttttaagaga atatgtactg tatgttgaac gaagaactta agagaaagta
     2041 tggctgcttg actctgtgga gcactaactc agcagagcca gggagaggag cactcaggat
     2101 tcatggaggg gaggcttggt ggctctgtgg gtcccgatga agggtgagtg agtgcacacc
     2161 caatcatggc accccaacct tctgcttgtt tagtgtccta gcaaggggag ctgttgtgat
     2221 ccgcttgtgc ctctcaggat tgctgggctt ttctctacca aaaaggccta gcctggtgtc
     2281 ctagtgtaga ttacaagaca ctgccagcca ggcggtgatg gcacacacct ttaatctcag
     2341 ctctcgggag gcagaggcag gcagatcttt gtgagttcca ggacagcaag ggtggcacag
     2401 agaaacactg tctcaaaaaa accaagaagg aggagaagga ggaagaagga agaggaagaa
     2461 ggagacggaa aagaaaagga aaccagaacc gcagcacagg cagcagtagt ggctaccact
     2521 gcccgtcctc agaacaccag gtagcttggc agttattaga tggtcatgag ggtaaagatg
     2581 tgatcatcct ttctcttctg aggtacactg taggcaagga tttccagcaa gattctccta
     2641 gaatcgctac gcacaggtgt cctttgtgag caccaaaggg agcaccaaag gacccagccc
     2701 agtgacccca ctcttcactg cagggctgac aggaaatcat ggtctccttg gtttcttctg
     2761 tatgtagcca cttaaagaaa acctagcagc taaaaaataa aaatacacat tgaggt
//
