LOCUS       XM_039089615             780 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus HscB mitochondrial iron-sulfur cluster
            co-chaperone (Hscb), transcript variant X4, mRNA.
ACCESSION   XM_039089615
VERSION     XM_039089615.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..780
                     /gene="Hscb"
                     /gene_synonym="RGD1311005"
                     /note="HscB mitochondrial iron-sulfur cluster
                     co-chaperone; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 ESTs, 7 long SRA reads, 2
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 81 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:360826"
                     /db_xref="RGD:1311005"
     CDS             56..658
                     /gene="Hscb"
                     /gene_synonym="RGD1311005"
                     /codon_start=1
                     /product="iron-sulfur cluster co-chaperone protein HscB
                     isoform X4"
                     /protein_id="XP_038945543.1"
                     /db_xref="GeneID:360826"
                     /db_xref="RGD:1311005"
                     /translation="MWSCRARSLLCVWEVRLARFLGRSLLSSNAASGKSIEPQCWNCG
                     RAMGAGRGDEFFCAHCRALQPPDPTRDYFSLMNCNQSFRVDIRKLQQRYQQLQRLVHP
                     DFFSQKSQTEKRFSEKHSTLVNDAYKTLQAPVSRGLYLLKLQGIEIPEGTDYRTDSQF
                     LVEIMEINEKLADAKSEAAMEEVEATVRAGDRTQGFVLPS"
ORIGIN      
        1 cactttcttc ccttttctcc ggtctggtaa cccgggccag caggcggcct tacgaatgtg
       61 gagctgcagg gctcggtccc tgctgtgcgt gtgggaggtg cgactggcta ggttccttgg
      121 taggagcctg ctgagcagca atgccgcctc gggaaagagc atcgagccgc aatgctggaa
      181 ctgcggccgc gcgatgggag ccgggcgtgg ggatgagttt ttctgcgcac actgccgcgc
      241 gctgcagcct cctgacccca ctcgggacta cttcagcctc atgaactgca accaatcctt
      301 cagggttgac atccggaaac ttcaacaaag gtaccagcaa ctacagcgcc ttgtccaccc
      361 agatttcttc agccaaaagt ctcagactga gaaacggttc tcggagaagc attcgaccct
      421 ggtgaatgat gcctacaaga ctcttcaggc ccccgtgagc agaggactat atcttctaaa
      481 gctccaagga atagaaattc ctgaagggac agattataga acagacagtc agttccttgt
      541 ggaaatcatg gaaatcaatg aaaaactcgc agacgccaaa agtgaggcag ccatggaaga
      601 ggtagaagcc actgtcagag ctggggaccg aacccagggc tttgtgcttc ctagctaaac
      661 agaaagaatt tacggacaat ataaacagag cttttgaaca aggtgatttt gaaaaagcca
      721 aggaacttct tacaaaaatg agatactttt caaacataga agaaaagatc aagttaagca
//
