LOCUS       XM_008769340             947 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus HscB mitochondrial iron-sulfur cluster
            co-chaperone (Hscb), transcript variant X1, mRNA.
ACCESSION   XM_008769340
VERSION     XM_008769340.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008769340.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008769340.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..947
                     /gene="Hscb"
                     /gene_synonym="RGD1311005"
                     /note="HscB mitochondrial iron-sulfur cluster
                     co-chaperone; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 ESTs, 7 long SRA reads, 2
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 48 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:360826"
                     /db_xref="RGD:1311005"
     CDS             57..797
                     /gene="Hscb"
                     /gene_synonym="RGD1311005"
                     /codon_start=1
                     /product="iron-sulfur cluster co-chaperone protein HscB
                     isoform X1"
                     /protein_id="XP_008767562.1"
                     /db_xref="GeneID:360826"
                     /db_xref="RGD:1311005"
                     /translation="MWSCRARSLLCVWEVRLARFLGRSLLSSNAASGKSIEPQCWNCG
                     RAMGAGRGDEFFCAHCRALQPPDPTRDYFSLMNCNQSFRVDIRKLQQRYQQLQRLVHP
                     DFFSQKSQTEKRFSEKHSTLVNDAYKTLQAPVSRGLYLLKLQGIEIPEGTDYRTDSQF
                     LVEIMEINEKLADAKSEAAMEEVEATVREPSFCNEQPWGSEVAAPALPLALPLLQYDG
                     MEMFSFSWLASHYWFSKHLLNRKNLRTI"
ORIGIN      
        1 ccactttctt cccttttctc cggtctggta acccgggcca gcaggcggcc ttacgaatgt
       61 ggagctgcag ggctcggtcc ctgctgtgcg tgtgggaggt gcgactggct aggttccttg
      121 gtaggagcct gctgagcagc aatgccgcct cgggaaagag catcgagccg caatgctgga
      181 actgcggccg cgcgatggga gccgggcgtg gggatgagtt tttctgcgca cactgccgcg
      241 cgctgcagcc tcctgacccc actcgggact acttcagcct catgaactgc aaccaatcct
      301 tcagggttga catccggaaa cttcaacaaa ggtaccagca actacagcgc cttgtccacc
      361 cagatttctt cagccaaaag tctcagactg agaaacggtt ctcggagaag cattcgaccc
      421 tggtgaatga tgcctacaag actcttcagg cccccgtgag cagaggacta tatcttctaa
      481 agctccaagg aatagaaatt cctgaaggga cagattatag aacagacagt cagttccttg
      541 tggaaatcat ggaaatcaat gaaaaactcg cagacgccaa aagtgaggca gccatggaag
      601 aggtagaagc cactgtcaga gaaccctcat tttgtaatga gcaaccatgg gggagtgaag
      661 tcgcagcacc tgcgttgccc ttggcacttc ctcttctcca atatgatgga atggaaatgt
      721 tctcattttc ctggttggca agtcactact ggttttctaa acacttgcta aacagaaaga
      781 atttacggac aatataaaca gagcttttga acaaggtgat tttgaaaaag ccaaggaact
      841 tcttacaaaa atgagatact tttcaaacat agaagaaaag atcaagttaa gcaagaaccc
      901 tctctagttg ctaacttaaa gttttaaaaa taaactttgt atttctt
//
