LOCUS       NM_001109450            1231 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus heparan sulfate-glucosamine 3-sulfotransferase 6
            (Hs3st6), mRNA.
ACCESSION   NM_001109450 XM_001059400
VERSION     NM_001109450.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Cui,W., Dai,X., Marcho,C., Han,Z., Zhang,K., Tremblay,K.D. and
            Mager,J.
  TITLE     Towards Functional Annotation of the Preimplantation Transcriptome:
            An RNAi Screen in Mammalian Embryos
  JOURNAL   Sci Rep 6, 37396 (2016)
   PUBMED   27869233
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  AUTHORS   Xu,D., Tiwari,V., Xia,G., Clement,C., Shukla,D. and Liu,J.
  TITLE     Characterization of heparan sulphate 3-O-sulphotransferase isoform
            6 and its role in assisting the entry of herpes simplex virus type
            1
  JOURNAL   Biochem J 385 (Pt 2), 451-459 (2005)
   PUBMED   15303968
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On Oct 4, 2007 this sequence version replaced XM_001059400.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132299,
                              SAMD00132308 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..1231
                     /gene="Hs3st6"
                     /note="heparan sulfate-glucosamine 3-sulfotransferase 6"
                     /db_xref="GeneID:684979"
                     /db_xref="RGD:1584381"
     exon            1..508
                     /gene="Hs3st6"
                     /inference="alignment:Splign:2.1.0"
     CDS             96..1124
                     /gene="Hs3st6"
                     /EC_number="2.8.2.23"
                     /note="heparan sulfate (glucosamine) 3-O-sulfotransferase
                     6"
                     /codon_start=1
                     /product="heparan sulfate glucosamine 3-O-sulfotransferase
                     6"
                     /protein_id="NP_001102920.1"
                     /db_xref="GeneID:684979"
                     /db_xref="RGD:1584381"
                     /translation="MAGSSVLGGGAGDLQGVGTGQGTALRAPRALLALTALLLSAYCL
                     FALPGRCPPAARAPAPVPAPAEPPQASRRLGAPGLPVASGPGRRRFPQALIVGVKKGG
                     TRALLEFLRLHPDVRALGSEPHFFDRCYDRGLAWYRGLMPRTLDGQITMEKTPSYFVT
                     QEAPRRIHDMSPDTKLIVVVRNPVTRAISDYAQTLSKTPGLPSFRALAFRHGLGPVDT
                     AWSAVRIGLYAQHLDNWLRYFPLSHFLFVSGERLVSDPAGEVGRVQDFLGLKRVVTDK
                     HFYFNATKGFPCLKKAQGSGRPRCLGKSKGRPHPRVPEAVVQRLQAFYRPFNRKFYQM
                     TGQDFGWD"
     exon            509..1231
                     /gene="Hs3st6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccgggcgcc ctgaggctga gcgtgcgacg tgctatagcc gggatgcgcg gctgtctgcg
       61 gctcccgctc ccgggcctgg gcgctgtgcg accccatggc aggtagcagt gtcctgggcg
      121 gcggggccgg ggacctccag ggcgtaggga cgggccaggg gactgcactg cgtgctcccc
      181 gtgctctgct ggcgctcaca gctctgttgc taagcgccta ctgcctcttt gccctccccg
      241 gccgctgtcc acctgccgcc cgcgcccctg ctccggttcc cgcaccagcc gagccgcccc
      301 aagcctcccg ccgtctggga gcgcccggcc tgccggtggc cagcggcccg gggcgccggc
      361 gcttccccca ggcgctcatc gtgggcgtga agaaaggcgg cacgcgcgcg ttgctggagt
      421 tcctgcgctt gcaccccgac gtccgtgcac ttggctctga accccacttc ttcgacaggt
      481 gctatgatcg cggcctcgcc tggtaccggg gtctgatgcc acgtaccctg gatgggcaga
      541 tcaccatgga gaagaccccc agctactttg tgactcagga ggctccccgc cgaatccatg
      601 atatgtcccc agacaccaag ctgattgtgg tggtgcggaa ccctgtgacc cgggccatct
      661 ctgattatgc acagacactc tccaagaccc caggtttgcc cagcttccgt gccctggcct
      721 tccgccacgg cctgggtccc gtggacacgg cctggagcgc tgtacgcatt ggcctctacg
      781 ctcagcactt ggacaactgg ctacgctact tccctctgtc ccacttcctg tttgtaagcg
      841 gtgagcgcct ggtcagtgat ccagctggcg aagtgggccg tgtacaggac tttttgggtc
      901 tcaaacgggt tgtcactgac aaacacttct acttcaatgc taccaagggc ttcccctgcc
      961 tcaaaaaggc ccagggtagt gggcgccccc gatgcttggg taaatccaag ggccggcctc
     1021 acccccgagt gccggaggct gtggttcagc gcctgcaggc tttctaccgg cccttcaacc
     1081 gcaagttcta ccagatgact ggccaggact ttggctggga ctgatcaaga tctggctcag
     1141 ccttcccctg gatgcccaat acctttaatt tatgtccgtt tgactggtca ttgcagtgtt
     1201 taggaaataa agactggatt tgtcttcttc c
//
