LOCUS       NM_001401778            2770 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus heparan sulfate-glucosamine 3-sulfotransferase 4
            (Hs3st4), mRNA.
ACCESSION   NM_001401778 XM_017590466
VERSION     NM_001401778.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Feb 24, 2022 this sequence version replaced XM_017590466.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360176.1976342.1, CO394708.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-728               JAXUCZ010000001.1  187970127-187970854
            729-2770            JAXUCZ010000001.1  188373828-188375869
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q36"
     gene            1..2770
                     /gene="Hs3st4"
                     /note="heparan sulfate-glucosamine 3-sulfotransferase 4"
                     /db_xref="GeneID:108349781"
                     /db_xref="RGD:11422907"
     exon            1..728
                     /gene="Hs3st4"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..1365
                     /gene="Hs3st4"
                     /EC_number="2.8.2.23"
                     /codon_start=1
                     /product="heparan sulfate glucosamine 3-O-sulfotransferase
                     4"
                     /protein_id="NP_001388707.1"
                     /db_xref="GeneID:108349781"
                     /db_xref="RGD:11422907"
                     /translation="MARWPAPPPPPPPPPPLAAPPPVPGASTKGPPARKLLFMCTLSL
                     SVTYLCYSLLGGSGSLQFPLALQEPPGSAAEPPPSLPPPSLPPPGVRPGASSPPPDNA
                     SRGPPPEPPERFTTPAADGWGLASGGGARDAWPRSPPAPGDAVTEQDALLGRGAQELG
                     AAEELEGRRAANGSAERGPASTPDYGEKKLPQALIIGVKKGGTRALLEAIRVHPDVRA
                     VGVEPHFFDRNYEKGLEWYRNVMPKTLDGQITMEKTPSYFVTNEAPKRIHSMAKDIKL
                     IVVVRNPVTRAISDYTQTLSKKPEIPTFEVLAFKNRTLGLIDASWSAIRIGIYALHLE
                     NWLQYFPLSQILFVSGERLIVDPAGEMAKVQDFLGLKRVVTEKHFYFNKTKGFPCLKK
                     PEDSSAPRCLGKSKGRTHPRIDPDVIHRLRKFYKPFNMMFYQMTGQDFQWEQEEGDK"
     exon            729..2770
                     /gene="Hs3st4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagccgggag ccgcgatggc ccggtggccc gcaccgcctc cgcctccgcc gccgccgccg
       61 ccgctcgccg cgccgccgcc ggtgcccggc gcctccacta agggaccgcc ggcgcgcaag
      121 ctgctcttca tgtgcaccct atccctgtcc gtcacctacc tgtgctacag cctgctggga
      181 ggctcgggtt cgctgcagtt cccgctggcg ctgcaggagc ccccgggatc cgccgcggaa
      241 cccccgccga gcctgccacc tccctcgctg ccgcctcctg gcgtgcgccc gggcgcctcc
      301 tcgccgccgc cggacaacgc tagccgcggg ccaccgcccg agccccccga gcgcttcacg
      361 acccccgcgg ccgacggctg gggactggcg agcggtggcg gtgctcggga cgcctggccc
      421 aggagcccgc ctgccccggg agacgcggtc acggagcagg acgcgctgct ggggcgcggg
      481 gcgcaggagc tgggcgccgc cgaggagctg gaaggccgga gggcggccaa cgggagtgcg
      541 gaacggggcc ccgccagcac ccctgattat ggggagaaga agctgcccca ggcgctgatc
      601 atcggggtca agaaaggagg gacgcgcgcg ctgctggagg ctatccgagt ccacccggac
      661 gtaagggcag tgggcgtaga gccgcacttc ttcgacagga actacgagaa gggactggag
      721 tggtacagaa atgtgatgcc taagacattg gatgggcaga taaccatgga gaagaccccc
      781 agttattttg tgacgaatga ggctcccaag cgcatccact ctatggccaa ggacatcaaa
      841 ctcattgtgg tggtacgaaa cccagtgact agggctattt ctgactacac ccagacactg
      901 tcaaaaaagc cagagatccc cacctttgag gtgctggcct tcaaaaaccg gaccctgggg
      961 ctgattgatg cctcgtggag tgccattcgc attgggatct acgctctgca tctggagaac
     1021 tggctgcaat attttcccct ctctcagatc ctgtttgtca gtggtgagcg actcatagtg
     1081 gaccctgcag gggagatggc caaggtccag gatttcctag gcctcaagcg tgttgtgact
     1141 gagaagcact tttacttcaa caaaaccaag ggattcccct gcctgaagaa gccagaagac
     1201 agcagtgccc caagatgttt gggcaagagc aaaggtcgga ctcatccccg aattgaccca
     1261 gatgtcatcc atagacttcg gaaattctac aaacccttca acatgatgtt ttaccaaatg
     1321 actggtcaag atttccagtg ggaacaggaa gagggtgata agtgaggcta acggtgtgga
     1381 gggaaggcta atgaatagca aggatactct ttaggagagt tccaaattcc ccaggttcag
     1441 aagcttcagc catgctggag taccaagtag attgttaacc tgatccgttc aggttacatc
     1501 caatgtcgtg ggcttaggca gaggtataga cctcatggca tccctgtgga agaaccaaca
     1561 gtatctggtt gaccagacgg ccactcaaat ccaccatgaa tagtctcttc tgctagctaa
     1621 tagagtggga aaacgggata aaacatcttc taatgtcaca gacagatgct atgttgagtg
     1681 tcagaaagaa agaaagaatg aatgaatgaa tgaaagagat aggatggaag gaaggaaggt
     1741 gtactttgca agagctctta ttatgatctt gggagtctgg attctagcct tgtatttaat
     1801 ccctagtaca taaacttcta ccctggcatc tctccagaat gctgtttgta agtgagagct
     1861 ccaagactcc cagggagcaa tatcctccct ccaatgcctg tctagccttc ccatcaaagg
     1921 cctcatccca caccctttga tttcctccct ccccacaata tgaaggcaaa ggcatgcacg
     1981 tatgttcttc accaaaaaat aaaataaaat aaaataaata gcctacaccc ctagagcctt
     2041 ctatctgaga gacatccaaa gtggatctct ctcttcatga gtgttctaaa ttatagagaa
     2101 gttcagcaca catcctcacc ttgggatctg gcctacacaa atgctcccgg aacagggaga
     2161 tagcatctgt gctgagccct gaggttggca acgatgaatg cttggaactg tgggtatcag
     2221 gcaaaaccca gacacttggt ggggggcctc ttaccttaag atccttgtct gtaaggatca
     2281 tgatcctggg gcatgctcta agggacaggc tctgccctag aggcaaaaac agagcttgct
     2341 tgttagttgt tcagagtcac ccttccagat gcagagagga aggaacccct caatgttttt
     2401 ctgtttgtct gatgctgccc cctcagggtc acctcatggt tcatttttct ctactcagag
     2461 atgccattca ttgggccatt ggcaagagtg ctgctgcttt gcagtgtgaa gtgggtgggg
     2521 gagggcaagg actgtctgca gacatccttt tcaagggctg ccaaataaag tgtcccttcc
     2581 cattagtatg gttcaattaa aacaccgcgt ttgacataaa gcacttgttc tcagatctcc
     2641 aaagccagga attgtagtaa aattggaaat gtgtatgagt ggggagagtt gaatctgttc
     2701 agctgttatt aaactgtcat ttctcccact aaatggaaac tgtgttgtta taaagcttaa
     2761 tgcaacctga
//
