LOCUS       XM_017596027            4252 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus HOATZ cilia and flagella associated
            protein (Hoatz), mRNA.
ACCESSION   XM_017596027
VERSION     XM_017596027.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017596027.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017596027.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4252
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4252
                     /gene="Hoatz"
                     /note="HOATZ cilia and flagella associated protein;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 2 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     37 samples with support for all annotated introns"
                     /db_xref="GeneID:100359479"
                     /db_xref="RGD:2323814"
     CDS             1135..1641
                     /gene="Hoatz"
                     /codon_start=1
                     /product="cilia- and flagella-associated protein HOATZ"
                     /protein_id="XP_017451516.1"
                     /db_xref="GeneID:100359479"
                     /db_xref="RGD:2323814"
                     /translation="METGPRGCPSVRKEPQEICSPGLLVFTGCSEQDANLAKQFWLGA
                     SMYPTTESQLVLTRGSSQRLPVARNSKVLVSERNSVKPFPFDHNKEEILFAKAQKVQE
                     SEEKANYLQKAKKRDEILQLLRKQREERILKELISLPYKPKAKMPKSEEVLSESDLKD
                     QEEVKALE"
ORIGIN      
        1 gttactaggc agtgtagtta gctgattgct aatagtacca atcactaacc acacagccag
       61 gtaaaaagac tgaaattcct ccgacagagc ctcctgtgca tcattttggt gaggacagcc
      121 acagggaaat agccttacca tctactacct attagtagtt taggagaaaa aaacacgcta
      181 gcccttagct gctaagtata caatgtatca atatgtgtgg ggtacatttt tggtgatttt
      241 ttagatatat tggaaaatag aaataattac cccttagctg atttggtcat tatattgact
      301 tgtgattatt aatctctgga ctttacctga cactatattt tattaataac actctaaaaa
      361 ataaagcgcc atgaaaatct tcagctatcg tgtccatttc cttctccaaa aactggcttt
      421 aggatctcca tctcagttcc tgtcaccccc taaagtaatt taaatggtca gttgctatac
      481 agacaaaatc tccagggtaa cgtctcacac ataattgtga acctgaaagg gtgtgttcaa
      541 tgttttcatt tttctcgggg tgggggaact cagccccctt tacggggtat atttttaagg
      601 tgataacagt tctctaggca aattgtggtg ggaataatta gtgaacatta tttaaaacca
      661 gcttgtttcc taagatttgt aataaaagat ttaagaggtt ttaaatcaca aaagctgtat
      721 ccatgggtac ctctcggccc agttctagac taggacatta tgcagatgta tcagtgaaga
      781 cccaagaact tcccgagttg agtgcggagg gagccttggc aatcttgtcc aaaagaggca
      841 ggcgcttttt aaagttcaca ttattgggct atttggggga ggaggggacg ctggttgagg
      901 atctaagaca ctccaggatt gtacacatca caaagttgag gcttttactc ttaaggcttg
      961 actaccccga aatttgtgac ttcgacagaa gccagctgca gataggccac aagccctcga
     1021 ggaactccag ctcctacgga agaaacacag gcattccggt ggtggcagtt accaacccga
     1081 ccgttctcca gtgggggcgg ggcgccagag ctaagggaag cgtcctgagt caccatggaa
     1141 acggggccca gaggctgtcc tagcgtcagg aaggaaccgc aggaaatctg ctcccctgga
     1201 ttacttgtgt tcactggctg ctctgagcag gatgccaact tggctaagca gttttggctc
     1261 ggggcgtcca tgtaccccac taccgaatct cagctggtgc tgacccgagg cagtagtcag
     1321 aggctaccgg tggcgcggaa ctctaaagtc cttgtgagcg agagaaattc tgtcaagccc
     1381 tttccctttg atcacaacaa ggaagagatt ctctttgcta aagcccaaaa ggttcaggaa
     1441 tctgaagaga aagcaaacta tctccaaaag gccaagaaga gagatgagat tctccaactt
     1501 ttaaggaaac aaagagaaga gaggatcttg aaagaactga tttcattacc ttataaacct
     1561 aaggccaaga tgcccaaatc agaggaagtt ttatcagagt cagacctgaa ggaccaagaa
     1621 gaagtcaaag ccttggaatg atctgattgg catatggtag caagtgactg acgtgtgtac
     1681 acccttaaag caagttatgc ctccatcagg atcagtaggc aaatgatgtg tagtttccca
     1741 ggaatttgac aattactgaa cattcatgta aaaatagagg aaactaaaat ttcagactac
     1801 agacaagtgt gttttgtcag ttactgaata tttgtgtcta gcttatttac tgcatactat
     1861 tatgtctgac atcatgcctt aatcatcttt ctcctcttaa tcatcccaaa ttcctggttt
     1921 ttgtttcact tgaagtgtgt ttccacaatg tatatattta tttgtattat gaataaataa
     1981 gaataagggg aacaccctta tagaagaggg gaaagggaca ggacgagggc ttatgtccag
     2041 gaaactggga aagggaataa tattgaaatg taaatttaaa aaaatccaat aaaaaagaac
     2101 aaaaaataaa caggaataag gaactccata tgagccctga tgtgggtact atttgtaaaa
     2161 ataataaaac aaacattctt aaaaacttaa agccttctcc taaaaacacc ccttttccaa
     2221 aacttggctt ctcccatgtg tagaacaggc ccgaagccac aggtgggtta ctgctgggtc
     2281 tctgaaaagt ggacttggcc agccgtgtca tatgtaccct attgacagcc cacctctgca
     2341 tacactggag agcaaccagt gaaggatttg tcccttctgc atgtcgagaa tagaagacat
     2401 cgtctgtatg ctgtcacagt gaagtatttc tcacacaggt gaccttggta aagactgaca
     2461 acaggtcgtc gaagcctgaa gttttaaatc acattactag taccttttcc tcggatccca
     2521 cactcattac ggattctttc attgccaaaa ggaagacagt ttgctccaca ggccaagcac
     2581 tggtttaccc taggattata atcccccgtg taaacacatg acaagttaag cagccatcac
     2641 ccaaaatcct aaaatcagaa agaagttgag tatccaaagt tcacaagtgt tttagagtgc
     2701 tggtatacca tcacaaggag aagatgtgct ttagtaaacc tgaataagca gacacattaa
     2761 agtattgtag acggtgctaa ggagacagtg cagtggccct gagtgcctct cacatgagca
     2821 tgagaacctg gatccctagc atctacataa aaagctggac atccagggtc agcacctgta
     2881 accccagact tggagacaga gcctggagga tctgtcgagg tgacatggct ctcactagcc
     2941 ctctcattta gacaattggt gagctccaaa ttcagcagag atattgtctc aagaaataat
     3001 atgagaagta gagtacctac gaaataagaa gtggaggaag acacccaaag tcagtgtctg
     3061 gcctccatat atcatgcata agtacacaca cacacacaca cacacacaga ggcacatata
     3121 tgcaccccac aaaacacaga aatcacattg tattgcagaa cattactttc aggctgtgtt
     3181 ataagatgta taggaaacaa ttctgggttc aaaattatgt cctatcacca aaataatctc
     3241 agtatatatg tgtgaatatc ccaaaatgca aaacttgtaa tttttaactg gtttcttaat
     3301 taactctgag ctcatcaagc tgagcaatgg atcttgggtc aaagaaattt ttccacgaaa
     3361 aattacacat tataagtttt cttgtcaact ggccatccca cagtgacaca tgcctgcatt
     3421 ggcaggaata acaggtcgtt attactacaa cagtactgct taacaaggag ttccagagca
     3481 atctttagag ttcatacgag gtcagctcag gctctgacag gtctgagtcc aggccactta
     3541 aagaagtctg gactgaggca gccctgcctc acataccacc ctcttgggga cattcctgga
     3601 ccagtaggat atctgaggca tgctcctctc agaagacaaa agaggataag tagaacagga
     3661 aagggtcttt ctgctgtagg ctcaaagtcc tagtttattc cattgactaa tcaactctca
     3721 tggtgtaggg aaacacacta cctttttagt aaggagaaca atatcatcac aataaagagt
     3781 attgtcttag ggttttactg ctgtgaacag acactgtgac caaggcaagt cttataaagg
     3841 acaacattta attggggctg ccttacaggt tcagaggttc agtgcattat catcaaggtg
     3901 ggagcatggc agcatccagg caggcatggt acaggcagag ctaggagttc tacgtcatct
     3961 gaaggctcct actggaagac tgccttccag gcagctcaga tgagggtctt aagcccacgg
     4021 ccacagtgac acatctactc caacaaggcc acacctccta acagtgccat tccctgggct
     4081 gagcacatac aaatctaaca gatatgcatc ctgggaggtg ggaagtattg gggtccttac
     4141 tgtatgccac tacactcagt taattgcata tgctgacaaa gccccaatgt ggaccaaagt
     4201 cagagtgtcg aaaggagaac tcgagacaca attattggaa accacgtggt ag
//
