LOCUS       NM_001108477            3746 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus heterogeneous nuclear ribonucleoprotein U-like 1
            (Hnrnpul1), mRNA.
ACCESSION   NM_001108477 XM_001070479 XM_001070561 XM_001070607 XM_001070649
            XM_341807
VERSION     NM_001108477.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3746)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 3746)
  AUTHORS   Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
            C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
            Hentze MW.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 3746)
  AUTHORS   Kzhyshkowska J, Schutt H, Liss M, Kremmer E, Stauber R, Wolf H and
            Dobner T.
  TITLE     Heterogeneous nuclear ribonucleoprotein E1B-AP5 is methylated in
            its Arg-Gly-Gly (RGG) box and interacts with human arginine
            methyltransferase HRMT1L1
  JOURNAL   Biochem J 358 (Pt 2), 305-314 (2001)
   PUBMED   11513728
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473979.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001070607.1, XM_001070649.1, XM_001070479.1, XM_001070561.1,
            XM_341807.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3746
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..3746
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /note="heterogeneous nuclear ribonucleoprotein U-like 1"
                     /db_xref="GeneID:361522"
                     /db_xref="RGD:1307456"
     exon            1..384
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..2669
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein U-like
                     protein 1"
                     /protein_id="NP_001101947.1"
                     /db_xref="GeneID:361522"
                     /db_xref="RGD:1307456"
                     /translation="MDVRRLKVNELREELQRRGLDTRGLKAELAERLLAALEAEEPED
                     ERELEADDEPGLPGHNNEEVETEGGSELEGTAQPPPPGLQPHPEPGGYSGPDGHYVMD
                     NITRQNQFYETPVIKQENESVYDRRPLDMEPPQQAYRPELKTETKQEAPPSFLPPEAS
                     QLKTDRPQFQNRKRPFEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYN
                     CDLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPST
                     EPDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFA
                     DFECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYC
                     SILPGFTFIQHLPLSERIRGTIGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKK
                     YNILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQT
                     NVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANF
                     TLPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGFRGRGGGG
                     SFQRYDNRGPPGGNRGGFQNRGGGGGSGGGGGNYRGGFNRSGGGGYNQNRWGNNNRDN
                     NNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASSYNKNSNIPG
                     SSANTSTPTVSSYSPPQPSYSQPPYNQGGYTQGYTAPPPPPPPPPAYNYGSYGPYNPA
                     PYTPPPPPTAQTYPQPSYNQYQQYAQQWSQYYQNQSQWPPYYGNYDYGGYSGSTQGGT
                     STQ"
     exon            385..510
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            511..664
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            665..738
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            739..878
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            879..978
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            979..1091
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            1092..1358
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            1359..1481
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            1482..1610
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            1611..1779
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            1780..2070
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            2071..2360
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            2361..2552
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
     exon            2553..3746
                     /gene="Hnrnpul1"
                     /gene_synonym="Hnrpul1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccccttcgcc tcctgacagg caaggtttag gggggacaga gccctgggag gccgggccgg
       61 gctcgggggc cgccccgggg gcccgggcca tggatgtgcg tcgcctgaag gtgaacgaac
      121 ttcgcgagga gctgcagcgc cgcggcctgg acactcgcgg cctgaaggcc gagcttgctg
      181 agcggttgct ggcggcgcta gaggccgagg agcccgaaga cgaacgggag ctcgaggctg
      241 acgacgaacc ggggttacct gggcacaaca acgaggaggt cgagaccgag gggggctccg
      301 agctggaggg gaccgcgcag ccaccgccgc ccgggctgca gccgcacccg gagcccggcg
      361 gctactcggg gccggacgga cattatgtca tggacaatat taccagacag aaccaattct
      421 acgagacacc ggtcatcaag caagaaaatg agtctgtcta tgataggaga ccactagaca
      481 tggagccacc acagcaagca tatcgcccag aactgaagac agaaacgaag caggaagccc
      541 cacccagctt cctcccccct gaagcctcgc agctcaagac agacaggcca cagttccaga
      601 atcgaaagag gccttttgag gagaatcgag gccgtgggta cttcgagcac cgagaggacc
      661 gaaggggccg ttctcctcag cctcctgctg aagaggatga agatgacttt gatgacaccc
      721 ttgttgctat tgacacatat aactgtgacc tgcacttcaa agtggcccga gaccggagta
      781 gtggctatcc attgacaatc gagggctttg catacctatg gtcaggagcc cgtgccagct
      841 atggagtcag aagggggcga gtgtgttttg aaatgaagat caatgaggaa atctccgtga
      901 agcaccttcc atctacagag cctgaccccc acgttgtccg tattggctgg tccttggact
      961 cttgcagcac tcagctaggt gaagagcctt tttcctatgg ttatggaggc acagggaaga
     1021 agtctaccaa tagccgcttt gaaaactacg gagacaaatt tgcagagaac gatgtgattg
     1081 gctgctttgc ggacttcgaa tgtgggaatg atgtggagct ttcttttacc aagaatggca
     1141 agtggatggg cattgccttc cgaatccaga aagaagcttt agggggtcag gccctctacc
     1201 ctcacgtcct ggtgaagaat tgtgctgtgg aatttaactt tgggcagaga gcagagccct
     1261 actgttctat tctcccaggg ttcacattca tccagcacct tcccctcagt gagcggatac
     1321 ggggcaccat tggaccaaag agcaaagcag agtgtgagat tctgatgatg gtaggcctgc
     1381 ctgctgccgg caagaccaca tgggccatca agcacgcagc ctccaaccct tccaagaagt
     1441 acaacattct gggtaccaat gccatcatgg ataagatgcg ggtaatgggc ctgcgtcggc
     1501 agcggaacta tgctggccgc tgggatgtcc tgatccagca ggccactcag tgcctcaacc
     1561 gtcttattca gatcgctgcc cgcaagaaac ggaactatat cctagatcag acaaatgttt
     1621 atgggtcagc ccagaggcgg aaaatgagac catttgaagg cttccagagg aaagctattg
     1681 tgatctgtcc cactgatgag gacctaaaag accgcaccat aaagcgaact gacgaagaag
     1741 gaaaagatgt cccggatcat gcagtcttag aaatgaaagc taactttact ttgcctgatg
     1801 ttggagactt cctggatgag gttctgttca ttgagctcca gcgagaggaa gcagacaagc
     1861 tggtgaggca gtataacgag gaaggccgga aggccggccc accccctgaa aagcgctttg
     1921 acaacagagg tggtggcttc cgaggccgtg ggggtggcgg cagtttccag cgttatgaca
     1981 accgaggccc tcctggaggc aaccgaggag gcttccagaa ccgcggaggt ggtggtggca
     2041 gtggtggcgg aggaggcaac taccgaggag gtttcaaccg cagcggaggt ggtggctaca
     2101 accagaaccg ctggggtaac aacaaccggg ataacaacaa ctccaacaac cgaggcagct
     2161 ataaccgggc tcctcagcaa cagccaccac cacaacagcc accaccacca cagccaccac
     2221 ctcagcaacc accgccacca cctagctata gccctgctcg gaaccctccg ggagccagca
     2281 gctacaacaa aaacagcaac atccctggct ccagcgccaa taccagcacc cctacagtga
     2341 gcagctacag ccctccacag ccgagttaca gccagccgcc ctacaaccaa ggaggataca
     2401 cccagggcta cacagcccca ccacctccac ctccaccgcc acctgcctac aactatggga
     2461 gctatggccc ctacaatcct gccccctata ccccaccacc accccccact gcccagacct
     2521 accctcagcc cagctataac cagtatcagc agtatgccca gcagtggagc cagtactatc
     2581 agaaccagag ccagtggcca ccttactacg ggaactacga ctacggaggc tactcgggca
     2641 gcacgcaggg gggcacaagc acacagtagc aggtgctgga gcctccagag gctcatgctg
     2701 gctgcttcca ctagcacctg ccttggcccc tttcccctct gagtcctgtg gtgctgggga
     2761 cagagttatc ccggggctgc ctctctctag cccacttctt ccagaggggc ttctcccttc
     2821 atacagccag gcattttcct ctctggattc aaacaggcaa cagtgacctt ttcttttatc
     2881 tttgtcccct ccacttcctc ctctccctgc ctttttaact aaagaatccc tcccttggtt
     2941 acccagtgag cccacagtga ctggggagga tgcctgtctg cccctcccta ctctgctttt
     3001 tagccccttg gcttcccaga ctctcatgca gttggttgta aattcttcca ggagctgttt
     3061 tactgtctac ttttcgggat ttaaaaaaat tttcaaaaac cttaaaaaaa aaaaagttta
     3121 agaagcaaaa tgcagaggga ggaagcagtg actttttttt tggtaattat gctttttttt
     3181 ttaattttta gaatttgtct gtttttactg tgggtcagcc gttgatactt catcaaataa
     3241 ccatttcttt gctgagttca ggtaaccgag gaagagccac accctcgaaa caaacaacaa
     3301 aatcaccttt aacctacctt tttatatgat gcctcagttt cctgtaactc tgcacacaag
     3361 cgtctgttca gttggattgt aactgctttt tgtacttgga gagagtgtga ctattgaact
     3421 tgaaaccttt tactccagga gtcttggtag tttctggtgg gcttaagcgg gggagagggt
     3481 gaagggaagg tgggggcggg gccagcttcc ttgtagaccc taaagttcct cctccgtcac
     3541 cacctccatt gctcctccat gtgccagacc tccagagttt tacagtggtc cttttgatta
     3601 gtctcatttc ccctttacct gaatgttcta accggacttt agcaaactgc acttattaag
     3661 agatgtttta ccctgttttg ttttctttca ataaatgaca tggcacctct tatcaggaag
     3721 gaagcagggt tgaaacctgt tactga
//
