LOCUS       XM_233805               3085 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus heterogeneous nuclear
            ribonucleoprotein L-like (Hnrnpll), transcript variant X1, mRNA.
ACCESSION   XM_233805
VERSION     XM_233805.10
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_233805.11.
            
            On Jan 21, 2021 this sequence version replaced XM_233805.9.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3085
                     /gene="Hnrnpll"
                     /note="heterogeneous nuclear ribonucleoprotein L-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 32 ESTs, 5 long SRA reads, 9 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 234 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:313842"
                     /db_xref="RGD:1305861"
     CDS             332..2107
                     /gene="Hnrnpll"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein L-like
                     isoform X1"
                     /protein_id="XP_233805.5"
                     /db_xref="GeneID:313842"
                     /db_xref="RGD:1305861"
                     /translation="MSSTSSSPKEETYEEDREFESQAKRLKTEEGEIVYSAEESENRQ
                     EATPQAGSDSDSGGGDRGSGGGGGDGEEGDGGEEGDGEEGDEGDGDERGSGGDEGGSG
                     GGPRSMPPSTEGGGSHHKVSVSPVVHVRGLCESVVEADLVEALEKFGTICYVMMMPFK
                     RQALVEFENIDSAKECVTFAADVPVYIAGQQAFFNYSTSKRITRPGNTDDPSGGNKVL
                     LLSIQNPLYPITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKAALNG
                     ADIYAGCCTLKIEYARPTRLNVIRNDNDSWDYTKPYLGRRDRGKGRQRQAILGDHPSS
                     FRHDGYGSHGPLLPLPSRYRMGSRDTPELVAYPLPQASSSYMHGGSPSGSVVMVSGLH
                     QLKMNCSRVFNLFCLYGNIEKVKFMKTIPGTALVEMGDEYAVERAVTHLNNVKLFGKR
                     LNVCVSKQHSVVPSQIFELEDGTSSYKDFAMSKNNRFTSAGQASKNIIQPPSCVLHYY
                     NVPLCVTEETFTKLCNDHEVLPFIKYKVFDAKASAKTLSGLLEWKCKTDAVEALTALN
                     HYQIRVPNGSNPYTLKLCFSTSSHL"
ORIGIN      
        1 aaggcgggtg gaggctccgc ctgagcggcg gggagcggat tagggaggag ggaagaccgg
       61 aagccacggc cacggccccg gccccatcct tagtttcgcg ttccccccgg agctgggagc
      121 cgcgaagctg gcggagggag aggctggagg ctggctggga gataaaggga agcgtcccct
      181 cagcccgcgc tcccttctca gtcacgggct cctggagcgc gccgcggagg acgccgacgc
      241 ctctcagacc cgcgctgagg aggcgcagcc cgcggcgggg actgctcggc gacatctgag
      301 gcccatatcc cgcgccgtct ccaccgccgc catgtcctcc acctcctcct cccccaagga
      361 ggagacgtac gaggaggacc gggagttcga aagccaggcc aagcgcctca agacggagga
      421 gggagagatc gtctactcgg ctgaggagag cgagaatcgc caggaagcga cgcctcaggc
      481 ggggagcgat agcgacagcg gcggcggcga ccgaggcagc ggcggcggcg gcggcgacgg
      541 cgaggaaggc gacggtggag aagaaggcga cggcgaagaa ggcgacgaag gcgacggcga
      601 tgagagaggt agcggcggcg acgaaggcgg cagcggcggc ggccctcgga gcatgccccc
      661 gtccacggag ggaggtggaa gtcatcataa agtttctgtt tctcctgttg ttcatgttcg
      721 agggctctgt gaatccgttg tggaagctga ccttgtggag gcactggaga aatttgggac
      781 aatatgctat gtgatgatga tgccatttaa acgacaggct ctagtggagt ttgaaaatat
      841 agatagtgcc aaagagtgtg tgacatttgc tgcagatgtg cctgtgtaca ttgctggcca
      901 gcaggctttc ttcaactact ctacaagtaa aagaatcact cggccaggaa acactgacga
      961 tccttcaggg ggcaacaaag tcctcttgct ctctattcag aatcctcttt atccaattac
     1021 agtggatgtt ctatatactg tatgcaaccc tgttggaaaa gtacagcgta ttgttatatt
     1081 caagagaaat gggatacaag caatggttga atttgagtcg gtcctttgtg cccagaaagc
     1141 taaagcagca ctcaatggag ctgatatata tgccggatgt tgcacactaa aaattgaata
     1201 tgcaaggcca actcgtctaa atgttattag gaatgacaat gacagttggg actacactaa
     1261 accttatttg ggaagacgag atagaggaaa gggtcgccag aggcaagcca ttttgggaga
     1321 tcatccttct tcgtttagac atgatggcta tggatcgcat ggtccactat tgcctttacc
     1381 aagtcgttac agaatgggct ctagagatac acctgaactt gttgcttatc cattaccaca
     1441 agcctcttcc tcttacatgc atggaggaag cccatctggt tccgtcgtaa tggttagtgg
     1501 gttacatcag ctcaaaatga attgttcaag agtcttcaac ctattctgct tgtatggaaa
     1561 tattgaaaag gtaaagttta tgaagaccat tcctggcaca gcactcgtag aaatgggtga
     1621 cgagtatgct gtggaaagag ctgtcacaca ccttaacaat gtcaaactgt ttgggaaaag
     1681 acttaatgtt tgtgtgtcta aacaacattc agttgttcca agtcaaatat ttgagctaga
     1741 ggatggcaca agcagctaca aagattttgc aatgagcaaa aataatcgct ttacaagtgc
     1801 tggccaagct tctaagaata taatccagcc accctcatgt gtgctgcatt attacaatgt
     1861 tccactgtgt gtcacagagg agaccttcac aaagttgtgt aatgaccatg aagttcttcc
     1921 attcatcaaa tataaagtgt ttgatgcaaa agcttctgcg aaaactctgt ctgggctctt
     1981 agagtggaaa tgcaaaactg atgctgtgga agctctgact gcactcaatc actaccagat
     2041 ccgagtccca aatggttcca acccctatac actgaagctt tgcttttcta cgtcatccca
     2101 tttataagaa gagaagagca tgttagagtt tatgttcatc tttattacag ttttaaagct
     2161 atacttcatc catgataatc taaaatggtt gatctaatgt tgccttgcct actatataag
     2221 atcctgttct gtaataaaca tattttgcct caagtaaatt tgttgttaac gtaaatattg
     2281 ttttcacctt aagatagagt accataatgt agaccgtctg cagtttcatt gtggttatac
     2341 aaatgtatga tttctaacat tattacgaat cttgttccat ggtaaaatat atttgcattc
     2401 ttaatggtaa ttatctgcaa atgtttttcc attgtgtatg agatgaatgc aggtgaaagt
     2461 tttgcctttt actaccgaat tcctacaata gatgattgag tctgtcacag ttactcatat
     2521 taaatataat ttgtatttat tgttttaatc aaatttgaga atgacattgc atatgctgat
     2581 tttcaagaac tacaggttta gctgatgttg atttctgaaa ggattaatag acatgaacac
     2641 ccttgtatgc actcaaactc aaattggtgt gtttctttta aagagtcatc atccttttgt
     2701 atccacatgc ctctgttcct agttgcagtt tggaggtttt ataaagttat aataataagt
     2761 taatgtgttc atcttcatta ttttgcatgt gacctaatct taaaagtaca tatagtattt
     2821 gacattgata ttttaatact atagaagtta aaattaacag ttcttctata taataacatg
     2881 ggttccataa atgagtttca gagaacttgt gagcccttcc aaaattgtgt gtagagtttg
     2941 gaatatttgc atttttattt cttaatcttt gatccatcat aatatatgta tttttctata
     3001 tggtgtaaga tttaagaatt aattttattt ttgatcaaaa cagctatttg tctcaacacc
     3061 atttattaaa cattctccct ctgga
//
