LOCUS       NM_001106303            1497 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus H6 family homeobox 2 (Hmx2), mRNA.
ACCESSION   NM_001106303 XM_001054069 XM_215056
VERSION     NM_001106303.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Zheng,S., Damoiseaux,R., Chen,L. and Black,D.L.
  TITLE     A broadly applicable high-throughput screening strategy identifies
            new regulators of Dlg4 (Psd-95) alternative splicing
  JOURNAL   Genome Res 23 (6), 998-1007 (2013)
   PUBMED   23636947
REFERENCE   2  (bases 1 to 1497)
  AUTHORS   Wang,W., Grimmer,J.F., Van De Water,T.R. and Lufkin,T.
  TITLE     Hmx2 and Hmx3 homeobox genes direct development of the murine inner
            ear and hypothalamus and can be functionally replaced by Drosophila
            Hmx
  JOURNAL   Dev Cell 7 (3), 439-453 (2004)
   PUBMED   15363417
REFERENCE   3  (bases 1 to 1497)
  AUTHORS   Wang,W., Chan,E.K., Baron,S., Van de Water,T. and Lufkin,T.
  TITLE     Hmx2 homeobox gene control of murine vestibular morphogenesis
  JOURNAL   Development 128 (24), 5017-5029 (2001)
   PUBMED   11748138
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_215056.2, XM_001054069.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM062017.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q41"
     gene            1..1497
                     /gene="Hmx2"
                     /gene_synonym="RGD1565366"
                     /note="H6 family homeobox 2"
                     /db_xref="GeneID:293538"
                     /db_xref="RGD:1565366"
     exon            1..91
                     /gene="Hmx2"
                     /gene_synonym="RGD1565366"
                     /inference="alignment:Splign:2.1.0"
     exon            92..360
                     /gene="Hmx2"
                     /gene_synonym="RGD1565366"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..914
                     /gene="Hmx2"
                     /gene_synonym="RGD1565366"
                     /note="H6 homeo box 2"
                     /codon_start=1
                     /product="homeobox protein HMX2"
                     /protein_id="NP_001099773.1"
                     /db_xref="GeneID:293538"
                     /db_xref="RGD:1565366"
                     /translation="MGSKEDVGKGCPAAGGVSSFTIQSILGGGPSEAPREPAGWPARK
                     RSLSVSSEEEEPEEGWKAPACYCPDPHGPKEPSPKHHPPIPFPCLGTPKGSGGAGPAA
                     SERTPFLSPSHPDFKEEKERLLPAGSPSPGPERPRDGGAERQAGAAKKKTRTVFSRSQ
                     VYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAELEAANMA
                     HASAQTLVGMPLVFRDSSLLRVPVPRSLAFPAPLYYPSSNLSALPLYNLYNKLDY"
     exon            361..1497
                     /gene="Hmx2"
                     /gene_synonym="RGD1565366"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggatatgtcc ccttggcagg ccaaagtcag agaccacact tgcctgggaa actggaagtg
       61 gagcctggga gaatgagaag gaggtgaaaa ggatgggcag caaggaagat gtggggaagg
      121 gatgtccggc ggccggtggc gtctccagct tcaccatcca gtccatcctg ggcgggggcc
      181 cctccgaggc accgcgggag cccgccgggt ggccagccag gaaacgcagc ttgtctgtgt
      241 cctcggagga ggaggagccg gaggaaggct ggaaggctcc ggcttgctac tgcccagatc
      301 cgcacggccc caaggagcca agccctaagc accatccccc catccctttc ccttgcctgg
      361 gtacccccaa gggcagcgga ggcgcagggc ctgcggcctc ggagcgcacg cctttccttt
      421 ctccttctca cccggacttt aaggaagaga aggagaggct cttgcccgca ggctcgcctt
      481 ctccgggccc ggagcggcca cgggacggcg gtgcagagcg ccaagccgga gcggccaaga
      541 agaagacgcg caccgtcttc tcccgcagcc aagtgtacca gctcgagtcc accttcgaca
      601 tgaaacgcta ccttagcagc tcggagcgcg cttgcctcgc ctccagcctg cagctcaccg
      661 agacccaggt taagacttgg tttcagaatc gccgcaacaa gtggaagcga cagctttccg
      721 ccgagctaga ggcggccaac atggcacacg cgtcggcgca gactctcgtg ggcatgccgt
      781 tggtatttcg ggacagttcg ctactgcgag tgccggtgcc acgctctctc gcctttccgg
      841 ctccgctcta ttaccccagc agcaatctct cggccttacc gctctacaac ctgtacaaca
      901 agcttgacta ctgacacgcc cgctggctcc cggggcgcct ctggtcgcct gcagttgcct
      961 gcatagtccg gcgcggtcgg tatccttact ggggctccgg agcagagcgg cgcgtgtcca
     1021 gaaatattaa gaaatacacc atgtgtattc gttatgtctt atttatggcc tcttccctac
     1081 tttttgggtt ttttgttttg ttttgagtat ttatccgcat tcctcacacc agagcacctg
     1141 ctttctacac aaaaccaaac caacacgcca cgcgtatgaa actattttgg aaggggagat
     1201 tctcgggtag tggtgggaaa gggggttttg attggccggt agcaagaaaa aaaacatcag
     1261 aaaaatacca acaaaaccag gtagtctttc tcccatatat acacctgtat atgtatataa
     1321 atagtgtaca aggacacaat ctcagccgag cggagcccac taggacgttg gccattgaac
     1381 caatcacttc tctttattcc cttcatcttg aggatgagta ggggtgaaac gaggagagta
     1441 cagatctgta aatattttta aagagaaaaa aaataaaacg ttttaaacat ggttgct
//
