LOCUS       NM_001408848            2448 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus histone cluster 2 H2B family member E
            (Hist2h2be), mRNA.
ACCESSION   NM_001408848 XM_227459
VERSION     NM_001408848.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2448)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   2  (bases 1 to 2448)
  AUTHORS   Bonenfant,D., Coulot,M., Towbin,H., Schindler,P. and van Oostrum,J.
  TITLE     Characterization of histone H2A and H2B variants and their
            post-translational modifications by mass spectrometry
  JOURNAL   Mol Cell Proteomics 5 (3), 541-552 (2006)
   PUBMED   16319397
REFERENCE   3  (bases 1 to 2448)
  AUTHORS   Tollin,M., Bergman,P., Svenberg,T., Jornvall,H., Gudmundsson,G.H.
            and Agerberth,B.
  TITLE     Antimicrobial peptides in the first line defence of human colon
            mucosa
  JOURNAL   Peptides 24 (4), 523-530 (2003)
   PUBMED   12860195
REFERENCE   4  (bases 1 to 2448)
  AUTHORS   Kim,H.S., Cho,J.H., Park,H.W., Yoon,H., Kim,M.S. and Kim,S.C.
  TITLE     Endotoxin-neutralizing antimicrobial proteins of the human placenta
  JOURNAL   J Immunol 168 (5), 2356-2364 (2002)
   PUBMED   11859126
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jun 28, 2022 this sequence version replaced XM_227459.7.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360190.1010982.1,
                                        SRR26643429.9188.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2448              JAXUCZ010000002.1  186469452-186471899
FEATURES             Location/Qualifiers
     source          1..2448
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..2448
                     /gene="Hist2h2be"
                     /gene_synonym="RGD1562346"
                     /note="histone cluster 2 H2B family member E"
                     /db_xref="GeneID:295274"
                     /db_xref="RGD:1562346"
     exon            1..2448
                     /gene="Hist2h2be"
                     /gene_synonym="RGD1562346"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..427
                     /gene="Hist2h2be"
                     /gene_synonym="RGD1562346"
                     /note="histone H2B type 2-E; histone cluster 2, H2be"
                     /codon_start=1
                     /product="histone cluster 2 H2B family member E"
                     /protein_id="NP_001395777.1"
                     /db_xref="GeneID:295274"
                     /db_xref="RGD:1562346"
                     /translation="MPELAKSAPAPKKGSKKAVTKGQKKDGKKRKRSRKESYSIYVYK
                     VLKQVHPDTGISSKAMGIMNSFVNDIFERIANEASRLAHYNKRSTITSREIQTAVRLL
                     LPGELAKHAVSEGTKAVTKYTSAK"
ORIGIN      
        1 ttgtttttct gcttactaga ctgttttcca ctatttgctt tcaatcatgc ctgaactggc
       61 caaatccgct ccggctccca agaagggctc aaagaaggct gtcaccaagg ggcaaaagaa
      121 agacggcaag aagcgcaagc gcagtcgcaa ggagagctac tccatctatg tgtacaaggt
      181 gctgaagcag gtgcatccgg acacgggcat ctcgtccaag gccatgggca tcatgaactc
      241 gtttgtcaat gacatcttcg agcgcatcgc aaacgaggct tctcgcctgg cgcattacaa
      301 caagcggtct acaatcacat cgcgggagat ccagacggcg gtgcgtctcc tactgcccgg
      361 agaactggct aagcacgctg tgtcggaggg caccaaggcg gtcaccaagt acacaagcgc
      421 caagtagagg tctcctggat gaagcgctcc gggccctttt gggctttaaa gtctcttgca
      481 gtcactcgct caaatcagga gagagctttg tccactcgca ttagttttct agttcctatt
      541 ccaaagttac tttaagggtc ttggaaaagg tacactcaag acattaagcc tttgtggttt
      601 tgagtttccc tgtgggttat caggtttgca gttagctgca ccctacttag tttcttggag
      661 ttcgttttag actaggataa ctgaggtggg tctctgggcc cggcttccgt gttctagtct
      721 gttgtgtccc ggtgcctttt gcttgaccta aagtgaggtg gtttccttac cttgtcgatt
      781 agagccttct aatcagctaa gtctgtgttg atgaatgctg ggtaccagcc atctaaaact
      841 gaaactgctc tgactttagt agctgtgtcc tgggcaccag cggttagggc tgcttagggc
      901 ggtgtccctc tgacttactg atgtataaac acgagtgctt cgcgttgctg cagattcgtt
      961 agaaatctgt tgtagttctc tatcagactt tagaatccct gttcgtgtct tgttttgttc
     1021 tgtttaggtt cttgtttgtt tgtttggtcg gttggttggg tttttttctt cccatttaat
     1081 actttgcgtt aaccgctgca atgccaggtt accacaagga tactgttcct tttctctctg
     1141 ggcccgtgaa gccatctttc taatccacac actcagtaat tagcattttt ttcttcctgt
     1201 cgtgtctcca ggaaaagttg tctgaagttc cctttgcttt tttgtttaca ttgttgctgg
     1261 tcaagctggc ctgacatttt tatacccacc aatgtcttac tcacagcaga tgatactttt
     1321 ttaaattacc tattgaatta atttttgtat cactgcttct tttgaattac ttattgaatt
     1381 aatttttata tcaaggcggg gcggcagggg ctttgtccat ttgatgtatg tgaagacacc
     1441 ttggaatgga aatgttttga ggattctttt tccaaatttg tctctagtta tagttactgt
     1501 ggtggctgtt cttggttgtc aacccaagca ggtaggtaca cctgtgggga actttttttt
     1561 ttttttctta attccataat ttgaagtgag aagaaccact tttaatctgg atcttttgaa
     1621 gtggcaagat ccacctgcaa tctgagccac ccctgctggc agcttctatt aaaggagttt
     1681 gaagaaagaa gcttgttctt tgcgtgctta caaagatgtc tactttaact ggcattagag
     1741 cctactaatt caggattctg acatacactg aacaccagcc ttgtggactg aacaactact
     1801 ggattattgg accttccgtt agtaaatagc cattgttgga ctagctggag tcatctgttt
     1861 atgctcgcgt acatgtgtgt atgtttacca gggatggcag taatagttcc cttaaatttg
     1921 ccaatttaga gtaagctctt ggattttcat tgaattgaga acggtggcct tcctggggag
     1981 agacttttta ctgccaccac caccccattc ccaattgttc tattccctac agagataaac
     2041 tttcattttc caattgtccc tgtcttttac atttcagagg gctcgccggt aggctatgga
     2101 gtgaatggtg aagttaatgg gagctaaatg ggttggttcc gctggccgat gcttggccaa
     2161 cactatacac ttttgtctcc ctacctgaag acaaacagcc tgggctttct tttgtggagt
     2221 gtagcatttt gcatttttcc tttgaagtct tgattttgtt ggcgaaatac ttgacggtct
     2281 gatcactttc tcaggtctgc tttacggtaa gagttcctgg agctttgtga atccaaaaac
     2341 gagttccaga cattgtcatg aatagaataa attctgtttc ctgcatgtgt gttttcaagt
     2401 gtgtggacac tgttattatc attaataaag ttgccactta gtttcaaa
//
