LOCUS       NM_001408867             584 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus histone cluster 2 H2A family member A2
            (Hist2h2aa2), mRNA.
ACCESSION   NM_001408867 XM_003749350
VERSION     NM_001408867.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 584)
  AUTHORS   Tyagi,M., Khade,B., Khan,S.A., Ingle,A. and Gupta,S.
  TITLE     Expression of histone variant, H2A.1 is associated with the
            undifferentiated state of hepatocyte
  JOURNAL   Exp Biol Med (Maywood) 239 (10), 1335-1339 (2014)
   PUBMED   24764240
REFERENCE   2  (bases 1 to 584)
  AUTHORS   Khare,S.P., Sharma,A., Deodhar,K.K. and Gupta,S.
  TITLE     Overexpression of histone variant H2A.1 and cellular transformation
            are related in N-nitrosodiethylamine-induced sequential
            hepatocarcinogenesis
  JOURNAL   Exp Biol Med (Maywood) 236 (1), 30-35 (2011)
   PUBMED   21239733
REFERENCE   3  (bases 1 to 584)
  AUTHORS   Pramod,K.S., Bharat,K. and Sanjay,G.
  TITLE     Mass spectrometry-compatible silver staining of histones resolved
            on acetic acid-urea-Triton PAGE
  JOURNAL   Proteomics 9 (9), 2589-2592 (2009)
   PUBMED   19343714
REFERENCE   4  (bases 1 to 584)
  AUTHORS   Laine,B., Sautiere,P. and Biserte,G.
  TITLE     Primary structure and microheterogeneities of rat chloroleukemia
            histone H2A (histone ALK, IIbl or F2a2)
  JOURNAL   Biochemistry 15 (8), 1640-1645 (1976)
   PUBMED   1268188
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Jun 29, 2022 this sequence version replaced XM_003749350.5.
            
            ##Evidence-Data-START##
            Transcript is intronless :: CB786861.1, CB700342.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-584               JAXUCZ010000002.1  186490181-186490764 c
FEATURES             Location/Qualifiers
     source          1..584
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..584
                     /gene="Hist2h2aa2"
                     /gene_synonym="H2A.2; H2ac18; Hist2h2aa3; RGD1566374"
                     /note="histone cluster 2 H2A family member A2"
                     /db_xref="GeneID:690131"
                     /db_xref="RGD:1584037"
     exon            1..584
                     /gene="Hist2h2aa2"
                     /gene_synonym="H2A.2; H2ac18; Hist2h2aa3; RGD1566374"
                     /inference="alignment:Splign:2.1.0"
     CDS             73..465
                     /gene="Hist2h2aa2"
                     /gene_synonym="H2A.2; H2ac18; Hist2h2aa3; RGD1566374"
                     /note="histone cluster 2, H2aa2; histone H2A.2;
                     H2A-clustered histone 18"
                     /codon_start=1
                     /product="histone H2A type 2-A"
                     /protein_id="NP_001395796.1"
                     /db_xref="GeneID:690131"
                     /db_xref="RGD:1584037"
                     /translation="MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERV
                     GAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVT
                     IAQGGVLPNIQAVLLPKKTESHHKAKGK"
ORIGIN      
        1 ataaaagggt gaggcgtcgg cgttggcgca cagtttcctg gttgtgaccg tccgtctgtt
       61 tgcgctctcg tgatgtccgg ccgtggcaag caaggaggca aggcccgcgc caaggccaag
      121 tcgcggtcgt cccgcgccgg gctgcagttc ccagtgggtc gcgtgcaccg gctgctgcgc
      181 aagggcaact acgcggagcg cgtgggcgcc ggcgcgccgg tatacatggc ggcggtgctg
      241 gagtacctga ccgccgagat cctggagctg gcgggcaacg cggcccgcga caacaagaag
      301 acccgcatca tcccgcgcca cctgcagctg gccatccgca acgacgaaga actcaacaag
      361 ctgctgggca aagtgacgat cgcgcagggc ggcgtcctgc ccaacatcca ggccgtgctg
      421 ctgcccaaga agacggagag ccaccataag gcgaagggca agtgaggcgg ctgctggcac
      481 cggcccgcgt ctctacgaac ccttcccccc cccccccaga gaactctcaa aaaacggctc
      541 ttttcagagc cacccacaga atcagataaa gagttgtgtc acgg
//
