LOCUS       NM_001408765             473 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus histone cluster 1, H3b (Hist1h3b), mRNA.
ACCESSION   NM_001408765 XM_001057443
VERSION     NM_001408765.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 473)
  AUTHORS   Gao,J., Liu,W., Liu,J., Hao,N., Pei,J. and Zhang,L.
  TITLE     The Role of Acetylation and Methylation of Rat Hippocampal Histone
            H3 in the Mechanism of Aluminum-Induced Neurotoxicity
  JOURNAL   Neurochem Res 49 (2), 441-452 (2024)
   PUBMED   37897558
  REMARK    GeneRIF: The Role of Acetylation and Methylation of Rat Hippocampal
            Histone H3 in the Mechanism of Aluminum-Induced Neurotoxicity.
REFERENCE   2  (bases 1 to 473)
  AUTHORS   Kato,D., Osakabe,A., Tachiwana,H., Tanaka,H. and Kurumizaka,H.
  TITLE     Human tNASP promotes in vitro nucleosome assembly with histone H3.3
  JOURNAL   Biochemistry 54 (5), 1171-1179 (2015)
   PUBMED   25615412
REFERENCE   3  (bases 1 to 473)
  AUTHORS   Urahama,T., Horikoshi,N., Osakabe,A., Tachiwana,H. and
            Kurumizaka,H.
  TITLE     Structure of human nucleosome containing the testis-specific
            histone variant TSH2B
  JOURNAL   Acta Crystallogr F Struct Biol Commun 70 (Pt 4), 444-449 (2014)
   PUBMED   24699735
REFERENCE   4  (bases 1 to 473)
  AUTHORS   Todd,M.A. and Picketts,D.J.
  TITLE     PHF6 interacts with the nucleosome remodeling and deacetylation
            (NuRD) complex
  JOURNAL   J Proteome Res 11 (8), 4326-4337 (2012)
   PUBMED   22720776
REFERENCE   5  (bases 1 to 473)
  AUTHORS   Tachiwana,H., Osakabe,A., Shiga,T., Miya,Y., Kimura,H., Kagawa,W.
            and Kurumizaka,H.
  TITLE     Structures of human nucleosomes containing major histone H3
            variants
  JOURNAL   Acta Crystallogr D Biol Crystallogr 67 (Pt 6), 578-583 (2011)
   PUBMED   21636898
REFERENCE   6  (bases 1 to 473)
  AUTHORS   Tachiwana,H., Kagawa,W., Osakabe,A., Kawaguchi,K., Shiga,T.,
            Hayashi-Takanaka,Y., Kimura,H. and Kurumizaka,H.
  TITLE     Structural basis of instability of the nucleosome containing a
            testis-specific histone variant, human H3T
  JOURNAL   Proc Natl Acad Sci U S A 107 (23), 10454-10459 (2010)
   PUBMED   20498094
REFERENCE   7  (bases 1 to 473)
  AUTHORS   Hake,S.B., Garcia,B.A., Duncan,E.M., Kauer,M., Dellaire,G.,
            Shabanowitz,J., Bazett-Jones,D.P., Allis,C.D. and Hunt,D.F.
  TITLE     Expression patterns and post-translational modifications associated
            with mammalian histone H3 variants
  JOURNAL   J Biol Chem 281 (1), 559-568 (2006)
   PUBMED   16267050
REFERENCE   8  (bases 1 to 473)
  AUTHORS   Tagami,H., Ray-Gallet,D., Almouzni,G. and Nakatani,Y.
  TITLE     Histone H3.1 and H3.3 complexes mediate nucleosome assembly
            pathways dependent or independent of DNA synthesis
  JOURNAL   Cell 116 (1), 51-61 (2004)
   PUBMED   14718166
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Jun 24, 2022 this sequence version replaced XM_001057443.6.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26360176.520524.1,
                                        SRR26360172.900360.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-473               JAXUCZ010000017.1  47419196-47419668
FEATURES             Location/Qualifiers
     source          1..473
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..473
                     /gene="Hist1h3b"
                     /note="histone cluster 1, H3b"
                     /db_xref="GeneID:680498"
                     /db_xref="RGD:1591702"
     exon            1..473
                     /gene="Hist1h3b"
                     /inference="alignment:Splign:2.1.0"
     CDS             22..432
                     /gene="Hist1h3b"
                     /note="histone H3; histone H3.1"
                     /codon_start=1
                     /product="histone cluster 1, H3b"
                     /protein_id="NP_001395694.1"
                     /db_xref="GeneID:680498"
                     /db_xref="RGD:1591702"
                     /translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRP
                     GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLV
                     GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
ORIGIN      
        1 cattcctctc aacgttctca aatggcccgt actaagcaga ccgctcgcaa gtccaccggt
       61 ggcaaagccc cgcggaagca gctggccacc aaagctgccc gcaagagcgc tccggctacc
      121 ggcggcgtga agaagcccca ccgctaccgt cctggcaccg tggctctgcg cgagatccgg
      181 cgctaccaga agtcgacaga gctgctgatc cgcaagctgc ctttccagcg cctggtgcgc
      241 gagatcgcgc aggacttcaa gaccgacttg cgcttccaga gctcggcggt catggccctg
      301 caggaggcct gtgaggccta ccttgtgggt ctatttgagg acaccaacct gtgcgccatc
      361 cacgccaagc gtgtgaccat catgcccaag gacatccagc ttgcccggcg catccggggt
      421 gagagggcgt agttcccctc cccatttcta caaaaggctc ttttcagagc ccc
//
