LOCUS       NM_001408764            2875 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus histone cluster 1, H2bc (Hist1h2bc), mRNA.
ACCESSION   NM_001408764 XM_039096409
VERSION     NM_001408764.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Tollin M, Bergman P, Svenberg T, Jornvall H, Gudmundsson GH and
            Agerberth B.
  TITLE     Antimicrobial peptides in the first line defence of human colon
            mucosa
  JOURNAL   Peptides 24 (4), 523-530 (2003)
   PUBMED   12860195
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000292.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001408764.2.
            
            On Jun 24, 2022 this sequence version replaced XM_039096409.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132307,
                              SAMD00155335 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on single protein-coding
                                         transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-420               JACYVU010000292.1  300689-301108       c
            421-2875            JACYVU010000292.1  296842-299296       c
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..2875
                     /gene="Hist1h2bc"
                     /gene_synonym="Hist1h2bcl1"
                     /note="histone cluster 1, H2bc"
                     /db_xref="GeneID:680403"
                     /db_xref="RGD:1591796"
     exon            1..420
                     /gene="Hist1h2bc"
                     /gene_synonym="Hist1h2bcl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..448
                     /gene="Hist1h2bc"
                     /gene_synonym="Hist1h2bcl1"
                     /note="histone H2B type 1; histone cluster 1, H2bc-like 1;
                     histone cluster 1 H2B family member C like 1; histone H2B
                     type 1-C/E/F/G/I"
                     /codon_start=1
                     /product="histone cluster 1, H2bc"
                     /protein_id="NP_001395693.1"
                     /db_xref="GeneID:680403"
                     /db_xref="RGD:1591796"
                     /translation="MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYK
                     VLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLL
                     LPGELAKHAVSEGTKAVTKYTSSNSSRQSFSV"
     exon            421..2875
                     /gene="Hist1h2bc"
                     /gene_synonym="Hist1h2bcl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatctagagt tcggaactgc aggtcaagag tcccagtgac aacatgcctg agcctgcgaa
       61 gtccgctccc gccccgaaga agggctccaa gaaggccgtg accaaggcgc agaagaagga
      121 cggcaaaaag cgcaagcgca gccgcaagga gagctactcg gtgtacgtgt acaaggtgct
      181 gaagcaagta cacccggaca cgggcatctc ttccaaggcc atgggcatca tgaactcgtt
      241 cgtgaacgac atcttcgagc gcatcgcggg cgaggcgtcg cgcctggcgc attacaacaa
      301 gcgctcgacc atcacgtccc gggagatcca gacggccgtg cgcctgctgc ttcccgggga
      361 gttggccaag cacgcggtgt ccgagggcac caaggcggtc accaagtaca ccagctccaa
      421 ttcttcaaga caaagtttct ctgtgtagcc ctggctcaaa ctgctttctg gagaactctg
      481 acatgacctt gcaggctctc gacacctaac tgatactgta attgtgtttt caaaaggcta
      541 ttccaaacta gctcctttag ggtcatggaa aacttggtaa gaccagttgg ttccatgagt
      601 gtgggcccac tgtttcactt ctccggcctt gcttcttggt cagaaacaat gctgtgtaga
      661 ccatcatgat agtgtgtaag gcattctata ggtcagtgga tggaggtttg ggcaaatgcc
      721 ttacatgagg gaaaggcaaa tccataacta gaataaatac ctagtccaat aaagacaaac
      781 tactgtcgtt tgcctggaga atgtggtaca atgcagtcaa cctgccacca gctctctgat
      841 ggtcatcctt tgtatcagta ctgtatcaac aactggtcag gtcagccttg ttgtgtggga
      901 gtacaggttt tgaagccata tgtaacctcc atctctgcca ccatagcact ttttttataa
      961 gtccaggatg ctctagcact agttttctgc agatgatggc agagccttgc tccaaaatcc
     1021 caagggtgtc ctctgtgatt aacaccacaa gggactgcca aaggttccaa acagtgtcca
     1081 tatgtgtccc tgacacctcc agaaccactg ggtatgctgg atcatacggc ccaaatgcta
     1141 gagcagccag gacagcagcc aagatctgtt gaagagactt ctcctatgcc agatcccact
     1201 gagggatagc agctttccca atcacttaat atgtaggctg gagtaacata cccaaatgaa
     1261 aagagtgtgc tgtctccaga atccaaatca ggcagtaact gttgtgcttt ctgcatgccc
     1321 catatcacca attcctagaa atttcactga ggtagaagga aggcctgtgg attttgagtt
     1381 ttatctccta tcctttcaca tgcatatgta ttcctaacaa atcctcctat gcacttagtc
     1441 cagtcagcag aacaccatct accattatga ttttgtggaa gagacagacg atcaagatcc
     1501 tttctaacta aattacaaca caggctggaa agttaataca gcttggggga agtctatata
     1561 ggccttctgc tggccttgcc aaccaaaagc aaattgcttc tggtggtcct tgtggagagg
     1621 tacaagaaaa gggaattttc tagaacaata gctgcatgtc acttaccagg agatgtgctg
     1681 acctactgaa gtaaggatat agcatctggt atagcagctg caatcggagt cactattcga
     1741 ttaagtgtgt gattagtcaa ctgtcatttc ttcaggatcc acctgtcttc tgcacaagac
     1801 agatagagtt aaagacagat atgctggaaa ccaccacccc tacatttttc aagttcttga
     1861 tgtaggcact aacttcttta atccttccag ggatgcaata ttggtttttg aggtgctgtt
     1921 ttccttggta aaggcaactc caatggcttc tacttaacct ttccaaccac aatagctttc
     1981 actctaaaag ttatggaccc actgtcaaga ttctgccaac ttctaagcac atatatatat
     2041 atatatatat atatatatat atatatatat atatatagag agagagagag agagagagag
     2101 agagagaaat gattgaggat gagtaagttg gacttcagcc aaagctccat taaccatttg
     2161 gcctctctaa gtccctgctg taactgaagg agtacatgct tcatgtcgat tcagaaccag
     2221 tattaaatag ctcctagaaa gttcagttgt ttctttcccc aatatacagt tacactaata
     2281 tagggacata gattccctgt gaggaagaat gagggaaaag ctaacagtaa aatgtttatt
     2341 aaatatttta gcaaggtccc attttagcac agggcctggc cttttctttc attctgggaa
     2401 tcctgggtct gcaaacttca gagaaccaga gtttatttcc ataaagacaa aaggtataaa
     2461 ggtttggcca atcctcttgg aatgttaaaa gctcaggcaa aatggtggat agattttcct
     2521 cttgttggaa acctgagact tgttgaaaac tatcgacaaa ccactgcctg tgaagacaga
     2581 gccactattt cccaatgcag cctgtgctac caggttgtgt tgtaaagtaa ataaacacaa
     2641 aaaatattcc cttgtggggt gggtatgtaa ttgtatttca aaactacttt gaaaaccctc
     2701 acaaaccctc cagctactgg gagtgtggtt cgaacccaca aaggccattg aatcttaagt
     2761 ccaatgcctt aatcacttga ccgtcccagt cctgttgatt actctcctaa gatcattcta
     2821 tattcaaatg cataaaccta cgctgaacta ttaaagattt cttgaaatat ggtga
//
