LOCUS       NM_001024282             393 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  Rattus norvegicus histone cluster 1 H2A family member F
            (Hist1h2af), mRNA.
ACCESSION   NM_001024282 XM_574032
VERSION     NM_001024282.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   Nesovic Ostojic J, Zivotic M, Kovacevic S, Ivanov M, Brkic P,
            Mihailovic-Stanojevic N, Karanovic D, Vajic UJ, Miloradovic Z,
            Jovovic D and Radojevic Skodric S.
  TITLE     Immunohistochemical Pattern of Histone H2A Variant Expression in an
            Experimental Model of Ischemia-Reperfusion-Induced Acute Kidney
            Injury
  JOURNAL   Int J Mol Sci 24 (9), 8085 (2023)
   PUBMED   37175793
  REMARK    GeneRIF: Immunohistochemical Pattern of Histone H2A Variant
            Expression in an Experimental Model of Ischemia-Reperfusion-Induced
            Acute Kidney Injury.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 393)
  AUTHORS   Singh R, Mortazavi A, Telu KH, Nagarajan P, Lucas DM, Thomas-Ahner
            JM, Clinton SK, Byrd JC, Freitas MA and Parthun MR.
  TITLE     Increasing the complexity of chromatin: functionally distinct roles
            for replication-dependent histone H2A isoforms in cell
            proliferation and carcinogenesis
  JOURNAL   Nucleic Acids Res 41 (20), 9284-9295 (2013)
   PUBMED   23956221
REFERENCE   3  (bases 1 to 393)
  AUTHORS   Bonenfant D, Coulot M, Towbin H, Schindler P and van Oostrum J.
  TITLE     Characterization of histone H2A and H2B variants and their
            post-translational modifications by mass spectrometry
  JOURNAL   Mol Cell Proteomics 5 (3), 541-552 (2006)
   PUBMED   16319397
REFERENCE   4  (bases 1 to 393)
  AUTHORS   Boyne MT 2nd, Pesavento JJ, Mizzen CA and Kelleher NL.
  TITLE     Precise characterization of human histones in the H2A gene family
            by top down mass spectrometry
  JOURNAL   J Proteome Res 5 (2), 248-253 (2006)
   PUBMED   16457589
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from U95113.1.
            
            On May 27, 2005 this sequence version replaced XM_574032.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..393
                     /gene="Hist1h2af"
                     /gene_synonym="RGD1564767"
                     /note="histone cluster 1 H2A family member F"
                     /db_xref="GeneID:498753"
                     /db_xref="RGD:1564767"
     CDS             1..393
                     /gene="Hist1h2af"
                     /gene_synonym="RGD1564767"
                     /note="histone cluster 1, H2af"
                     /codon_start=1
                     /product="histone H2a"
                     /protein_id="NP_001019453.1"
                     /db_xref="GeneID:498753"
                     /db_xref="RGD:1564767"
                     /translation="MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLYKGNYSERV
                     GASAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVT
                     IAQGGVLPNIQAVLLPKKTESHHKSKGK"
     exon            1..393
                     /gene="Hist1h2af"
                     /gene_synonym="RGD1564767"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgtctggac gcggcaagca gggcggcaag gctcgggcta aggccaagac ccgctcctcc
       61 cgggccggcc tgcagttccc cgtgggccgc gtgcaccgtc tgctttacaa gggcaactac
      121 tcggagaggg tgggcgccag cgccccggtg tacttggcgg ctgtgctgga gtacctgacg
      181 gccgagatcc tggagctggc gggcaacgcg gcgagggaca acaaaaagac acgcatcatc
      241 ccgcgccacc tacagctggc cattcgcaac gatgaggagc tcaacaagct gctgggccgt
      301 gtgaccatcg cgcagggcgg cgtcctgccc aacatccagg cagtgctgct gcccaaaaag
      361 accgagagcc accacaagtc caaggggaaa tag
//
