LOCUS       XM_006242372            1076 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus HIG1 hypoxia inducible domain family,
            member 1C (Higd1c), mRNA.
ACCESSION   XM_006242372
VERSION     XM_006242372.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006242372.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006242372.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1076
                     /gene="Higd1c"
                     /note="HIG1 hypoxia inducible domain family, member 1C;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 ESTs, 3 Proteins, and 98% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     79 samples with support for all annotated introns"
                     /db_xref="GeneID:102555170"
                     /db_xref="RGD:7641479"
     CDS             147..437
                     /gene="Higd1c"
                     /codon_start=1
                     /product="HIG1 domain family member 1C"
                     /protein_id="XP_006242434.1"
                     /db_xref="GeneID:102555170"
                     /db_xref="RGD:7641479"
                     /translation="MSSDEWSAAEDEGQLSRLLRKSRDSPFVPVGMAGFVAVLSYGLY
                     KLNSRRDQKMSLHLIHMRVAAQGCAVGAVTLGVLYSMYKDYIKPRFFDAPKK"
ORIGIN      
        1 cctcggggtt gtctctcagc tttcctatga tcatgaatta gctggaaatt gcagggacag
       61 ggacagcctt aaacctgtgc tgatcaaaga gcagcaggag acagtcagca agcactgggg
      121 tcgggtccag cacgtacaag agagaaatgt cttcagatga gtggtcagca gctgaggacg
      181 aaggccagtt gtcccgactc ctcaggaaat cgagagactc ccccttcgtc cctgtgggca
      241 tggcgggctt tgtggctgtg ctgtcctatg gtctttacaa gctaaattcc agaagagatc
      301 agaagatgtc cctccatctc atccacatgc gggtggctgc ccaaggatgt gctgtggggg
      361 ccgtgactct gggtgtcctc tactctatgt ataaggatta catcaaacct cggttcttcg
      421 atgcacccaa aaaataaagc cagaggctgg actcgaggaa ggccggcgcc gtccttctcg
      481 gtgctgatcg tcagaaaaag gaatttctcg ctgtgttccg gatcaggctg catggtgtaa
      541 cttgcgttgt taagtagtag ctttctaaat ccacaccatt agctgaaaat taccccgctg
      601 ctgtcttctt ctgacttaat ccccctggag ctcaggacct tgtgcacaca ggcagcagcc
      661 gtgcctgcat caacaggctc tgacagaatc ctaaccaggc tctgggcaag aatgtggcca
      721 ccgtctctca gagagtggcg cggaccacat gtgtttcctt agaaaaggga tctggaggag
      781 gcaggatggc tcaggggtgg aggtgctggc tgccaactga cctcagctcg aaccctcgaa
      841 cccaaacagt ggaggaagag agggaactcc tctgttcccc acaagtgtgt gcaccgatac
      901 aaacaagcaa acaactgtag aaagagggtg ggaccggctc ttgcagagga cggggcttcc
      961 taacccccac atggcagctc tgcacggagt acgcatagag tgcccgtgca tacacgtgag
     1021 caaacactca tacgcatcaa agcaaataaa cctttttttt tttctttttt ttggaa
//
