LOCUS       NM_001304290            3232 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus HID1 domain containing (Hid1), mRNA.
ACCESSION   NM_001304290 XM_001081678 XM_213523
VERSION     NM_001304290.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3232)
  AUTHORS   Fong,K.W., Leung,J.W., Li,Y., Wang,W., Feng,L., Ma,W., Liu,D.,
            Songyang,Z. and Chen,J.
  TITLE     MTR120/KIAA1383, a novel microtubule-associated protein, promotes
            microtubule stability and ensures cytokinesis
  JOURNAL   J Cell Sci 126 (Pt 3), 825-837 (2013)
   PUBMED   23264731
REFERENCE   2  (bases 1 to 3232)
  AUTHORS   Wang,L., Zhan,Y., Song,E., Yu,Y., Jiu,Y., Du,W., Lu,J., Liu,P.,
            Xu,P. and Xu,T.
  TITLE     HID-1 is a peripheral membrane protein primarily associated with
            the medial- and trans- Golgi apparatus
  JOURNAL   Protein Cell 2 (1), 74-85 (2011)
   PUBMED   21337012
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On or before Jan 16, 2015 this sequence version replaced
            XM_213523.8, XM_001081678.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.2536020.1,
                                           SRR26360176.384265.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-195               JAXUCZ010000010.1  101108817-101109011 c
            196-345             JAXUCZ010000010.1  101102794-101102943 c
            346-516             JAXUCZ010000010.1  101101561-101101731 c
            517-630             JAXUCZ010000010.1  101100908-101101021 c
            631-737             JAXUCZ010000010.1  101100158-101100264 c
            738-854             JAXUCZ010000010.1  101099891-101100007 c
            855-1077            JAXUCZ010000010.1  101097436-101097658 c
            1078-1134           JAXUCZ010000010.1  101097193-101097249 c
            1135-1275           JAXUCZ010000010.1  101096252-101096392 c
            1276-1366           JAXUCZ010000010.1  101095979-101096069 c
            1367-1518           JAXUCZ010000010.1  101095565-101095716 c
            1519-1597           JAXUCZ010000010.1  101095385-101095463 c
            1598-1762           JAXUCZ010000010.1  101093357-101093521 c
            1763-1990           JAXUCZ010000010.1  101091727-101091954 c
            1991-2097           JAXUCZ010000010.1  101091292-101091398 c
            2098-2178           JAXUCZ010000010.1  101090719-101090799 c
            2179-2270           JAXUCZ010000010.1  101089863-101089954 c
            2271-2429           JAXUCZ010000010.1  101089596-101089754 c
            2430-3232           JAXUCZ010000010.1  101088526-101089328 c
FEATURES             Location/Qualifiers
     source          1..3232
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..3232
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /note="HID1 domain containing"
                     /db_xref="GeneID:287822"
                     /db_xref="RGD:1311422"
     exon            1..195
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     CDS             130..2493
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /codon_start=1
                     /product="protein HID1"
                     /protein_id="NP_001291219.1"
                     /db_xref="GeneID:287822"
                     /db_xref="RGD:1311422"
                     /translation="MGSADSKLNFRKAVIQLTTKTQPVEATDNAFWDQFWADTATSVQ
                     DVFALVPAAEIRAVREESPSNLATLCYKAVEKLVQGAEGGCHSEKEKQVVLNCSRLLT
                     RVLPYIFEDPDWRGFFWSTVPGAGRGGGEEEDENARPLAESLLLAIADLLFCPDFTVQ
                     NHRRNDVDSAEDVHSLDSCEYIWEAGVGFAHSPQPNYIHDMNRMELLKLLLTCFSEAM
                     YLPPSPESGSTNPWVQFFCSTENRHALPLFTSLLNTVCAYDPVGYGIPYNHLLFSDYR
                     EPLVEEAAQVLIVTLDHDSATSTSPTVDGTTTGTVMDDADPPGPENLFVNYLSRIHRE
                     EDFQFILKGIARLLSNPLLQTYLPNSTKKIQFHQELLVLFWKLCDFNKKFLFFVLKSS
                     DVLDILVPILYFLNDARADQSRVGLMHIGVFILLLLSGERNFGVRLNKPYSVRVPMDI
                     PVFTGTHADLLIVVFHKIITSGHQRLQPLFDCLLTIVVNVSPYLKSLSMVTANKLLHL
                     LEAFSTTWFLFSASQNHHLVFFLLEVFNNIIQYQFDGNSNLVYAIIRKRGVFHQLANL
                     PTDPPSIHKALQRRRRTPEPLSRAGSQEGASMEGSRPAAPAEPGTLKTSLVATPGIDK
                     LTEKSQVSEDGTLRSLEPESQQNSAEGSPSEGEPNQTWREQRRLSNASASGQWSPTSD
                     WILSWKSKLPLQTIMRLLQVLVPQVEKICIDKGLTDESEILRFLQHGTLVGLLPVPHP
                     ILIRKYQANSGTAMWFRTYMWGVIYLRNVDPPIWYDTDVKLFEIQRV"
     exon            196..345
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            346..516
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            517..630
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            631..737
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            738..854
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            855..1077
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            1078..1134
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            1135..1275
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            1276..1366
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            1367..1518
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            1519..1597
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            1598..1762
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            1763..1990
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            1991..2097
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            2098..2178
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            2179..2270
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            2271..2429
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
     exon            2430..3232
                     /gene="Hid1"
                     /gene_synonym="RGD1311422"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcgggcg gggttcgcag ctccagctcc ccggagagca gccggggctg cggagctgga
       61 gctggagcca cagccggagc ccgcggcaga gtcggaatcc ggggtcgggc tggagcgggc
      121 tccatcgaca tggggtctgc agactccaag ctgaacttcc ggaaggcggt gatccagctg
      181 actaccaaga ctcagcccgt ggaagccacc gacaatgctt tctgggacca gttctgggca
      241 gacacggcta cctcggtgca ggatgtcttt gccttggtgc cggcagcaga gatccgggct
      301 gtgcgagagg agtcaccctc taacttggcc accctgtgct acaaggctgt ggagaagctg
      361 gtgcaaggag cagagggtgg ttgccactct gagaaggaga aacaggtggt cctgaactgc
      421 agtcggctac tcacccgagt gctaccttac atcttcgagg accctgactg gaggggattc
      481 ttctggtcca cagtgcccgg ggcagggcgt ggagggggcg aggaagagga tgagaacgct
      541 cgacccttgg ctgagtcctt gctcctggcc attgctgact tgctcttctg cccggacttc
      601 actgtgcaga accaccggag gaacgatgtg gactcagcag aagatgttca ttccctggac
      661 agctgcgaat atatctggga ggctggggtg ggctttgccc attcccctca gcccaactac
      721 atccacgaca tgaaccggat ggagctgctg aagttgctgt tgacatgttt ctcagaggcc
      781 atgtacctgc ccccatctcc agaaagtggc agcaccaacc cctgggttca gttcttttgt
      841 tccacagaga acagacatgc gctacccctc ttcacctcac tcctcaacac cgtgtgtgcc
      901 tatgaccctg tgggctacgg gatcccctac aaccacctgc tcttctcgga ctaccgggag
      961 cccctggtgg aggaggctgc ccaggtgctt attgtcacct tggaccatga cagtgccacc
     1021 agcactagcc ccaccgtgga tggcaccacc accggcactg tcatggatga tgctgatcct
     1081 ccagggcccg agaacctgtt tgtgaactat ctgtcccgca ttcatcgtga agaggacttc
     1141 cagttcatcc tcaaggggat agctcggctg ctgtctaatc ccctgctcca gacctacctt
     1201 cccaactcca caaagaaaat ccagttccac caggagttgc ttgttctctt ctggaaactc
     1261 tgtgacttca acaagaaatt cctattcttt gtactgaaga gcagtgacgt gctggatatc
     1321 ctggttccca tcctgtattt tctcaacgat gcccgggcag atcaatctcg ggtgggtctg
     1381 atgcacatcg gagtcttcat cctgctgctt ctgagtgggg agaggaactt tggggtacgg
     1441 ctgaacaagc cctactcagt acgcgtgccc atggacatcc cggtcttcac aggcacacat
     1501 gcagatttgc tcatcgtggt attccacaaa atcatcacca gcggtcatca gcggttgcaa
     1561 cccctcttcg attgcctgct caccattgtg gtcaacgtgt caccctacct caagagcctg
     1621 tccatggtga ctgccaacaa gctcctgcac ctgctggagg ccttctctac cacctggttc
     1681 ctcttctcag cgtcccagaa ccaccacctg gtcttcttcc ttctggaggt cttcaacaac
     1741 attatccagt accagtttga tggtaattcc aacctggtct atgccatcat ccgcaaacgt
     1801 ggagtcttcc accagctggc caacctgccc actgacccgc cttccatcca caaggcactc
     1861 cagcggcggc ggaggacacc ggagcccctg tcccgggccg gttcccagga gggtgcttct
     1921 atggagggtt cccgccctgc tgcccctgcg gaaccaggca ccctgaagac tagcctggta
     1981 gccactccag gcatcgacaa gctgacggag aaatcccagg tatcagagga tggtaccttg
     2041 cggtctctag agccagaatc ccagcaaaac tcagcagaag gcagtccgtc tgagggggag
     2101 cccaaccaaa catggagaga gcagagacga ttgtccaatg catcagccag tggccagtgg
     2161 agcccaacat cagattggat cttgtcctgg aagtcaaaac tgccgctgca gaccatcatg
     2221 cgcctgctgc aggtcctggt tccccaggtg gagaagattt gcattgacaa gggtctgacg
     2281 gatgagtctg agatcctgag gttcctgcag catggcaccc tagtggggct tttgcctgtg
     2341 ccccacccca tccttatccg caagtaccag gcgaactcag ggactgccat gtggttccgt
     2401 acctacatgt ggggtgtcat ctatttgagg aatgtggacc cgcccatctg gtatgacacg
     2461 gacgtgaagc tctttgagat ccagcgggtg tgaggatgaa gacctgagga atagggccag
     2521 gagagctggt tctagtcccc agtgctcccc aaacccattg ttctgagctt aaaggtccat
     2581 tatcagggtg tggggcaagc agagtggttg gtcctggatg gcgggtccca ggtgcccaat
     2641 gtggctggag acaacagggt gtcaaaaaga aaaagtgccc ctctgccctc caggctgttc
     2701 taggagcccc ttgtctctgg agacaccccg cccactctgg ctcctccttc aagacctgcc
     2761 cttgtgctgc ctgtccccag aagctgccag gtcattgtgc cctagtaggt tttctcaaaa
     2821 aggagccatg tgctgcccca tgggggtacc tggtcacagt aaagggagtc ctggccacct
     2881 agttccaggc cttcttgcca gcgcccttgg ggaaagagtg gccgggctgc tggccaagga
     2941 ggctggaggc tgggggctgg ccatttatga agactgcggc gtgtgcatta ggagcctgaa
     3001 gtagggtatc gagggtgctc tgtccctggg tctgggaatt ttgcctggct ggtggagcct
     3061 gaaggatgcc agtgtccctg ccttccctgc tgcctgggtg gtgggagtta cacactctac
     3121 gagccccagc tctggcctcc gggtctcccc tgcctcccct gtgtcagtac aatctttgct
     3181 ctgcacaatc ggccacttta cacaataaaa catccctccc tgtgctgttg ta
//
