LOCUS       XM_039083291            1139 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 3-hydroxyisobutyryl-CoA hydrolase
            (Hibch), transcript variant X8, mRNA.
ACCESSION   XM_039083291
VERSION     XM_039083291.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1139
                     /gene="Hibch"
                     /note="3-hydroxyisobutyryl-CoA hydrolase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 1 long SRA read, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     86 samples with support for all annotated introns"
                     /db_xref="GeneID:301384"
                     /db_xref="RGD:1308392"
     CDS             191..973
                     /gene="Hibch"
                     /codon_start=1
                     /product="3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
                     isoform X5"
                     /protein_id="XP_038939219.1"
                     /db_xref="GeneID:301384"
                     /db_xref="RGD:1308392"
                     /translation="MGQQFVWRLQSRFSSIRRASVILQHLRMSKHTETAEVLLERRGC
                     AGVITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKAL
                     SEAKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATE
                     RSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDS
                     EKLHVLEEELLALKSPSAEDVAGVLESYHAKLFFSQYCGTDS"
ORIGIN      
        1 gcggaagttc ggggggtggg ccgctctggc cctctggagc gcagcggaag tgcagcggta
       61 ggccgctctg gccctccgga ggaattgtca gtgaccctgg ctcttctagg ttctggtcgg
      121 cggtgggcgg gtctgagaag tgcaggtgga gttgctacgt tctgctaatt catctctagg
      181 gttttaggcc atggggcagc agtttgtgtg gcggctccag tcgaggttca gctcaatcag
      241 aagagccagt gttattctgc aacatctgag aatgtccaag cacacagaga ctgcagaagt
      301 gctgctggag aggagaggct gtgcaggggt cataacgctc aacagaccca agttactcaa
      361 cgctctgagt ctgaatatga tccggcagat ctatccgcag ctaaagaagt gggaacgaga
      421 cccagataca ttcctgatca tcataaaggg agctggagga aaggccttct gtgctggagg
      481 ggacatcaaa gcactctcag aagctaaaaa agcagggcag actttgagtc aagatttatt
      541 cagagaagaa tatatcctga acaatgccat tgcgtcttgt cagaaaccgt atgttgccct
      601 tattgatgga atcacaatgg gtgggggagt tggtctttca gtccatggtc aattccgagt
      661 ggctacagaa agatctctct ttgctatgcc agaaacggga ataggactgt ttcctgatgt
      721 gggcggaggt tatttcttgc caagacttca aggaaaactg ggttacttcc ttgcactgac
      781 aggattcaga ctaaaaggaa gagatgtgca cagagcggga atcgccacac actttgtaga
      841 ttcagaaaag ttgcatgtac tggaggagga gttgttagcc ttaaagtccc cttcagctga
      901 ggatgttgct ggtgtcttag aaagctatca tgccaagttg tttttcagcc aatactgtgg
      961 aacagattct tgaaaactta cggcaagatg gttcaccttt tgctatggaa cagattaagg
     1021 ttattaataa aatgtctcca acgtcactaa agatcacact aaggcagctc atggagggct
     1081 ctacaaagac cttgcaagaa gtactgacca tggagtaccg gttaactcaa gcgtgtatg
//
