LOCUS       XM_039083287            2286 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 3-hydroxyisobutyryl-CoA hydrolase
            (Hibch), transcript variant X4, mRNA.
ACCESSION   XM_039083287
VERSION     XM_039083287.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2286
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2286
                     /gene="Hibch"
                     /note="3-hydroxyisobutyryl-CoA hydrolase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:301384"
                     /db_xref="RGD:1308392"
     CDS             552..1703
                     /gene="Hibch"
                     /codon_start=1
                     /product="3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
                     isoform X2"
                     /protein_id="XP_038939215.1"
                     /db_xref="GeneID:301384"
                     /db_xref="RGD:1308392"
                     /translation="MRELPHEGKRFSSIRRASVILQHLRMSKHTETAEVLLERRGCAG
                     VITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSE
                     AKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERS
                     LFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDSEK
                     LHVLEEELLALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSANTVEQ
                     ILENLRQDGSPFAMEQIKVINKMSPTSLKITLRQLMEGSTKTLQEVLTMEYRLTQACM
                     EGHDFHEGVRAVLIDKDQTPKWKPADLKDVTDEDLNSYFKSLGSRDLKF"
ORIGIN      
        1 gcagaatcta tttgtgattt aataaagcgt gtaagtcgtt ggaaggccca aggaccaaag
       61 gaaatcaaca aaagtaggcc cacaaggggt cccaaaattg agggcaacaa ggggtgttcc
      121 aaggcgaagt ggactgttca aggtgccctt gtaataattg ttcctgcacc aactgtaggg
      181 ccgcttgaac cttttcttga ggcatggacc actgatcgat ccagactgga tcatttgact
      241 tccaagatat tttatcagcc tggagtgcag gaggaacagc ggtctctatg aaaaaaggtc
      301 aggagctttg aactttggag tgtatcctgt gtttgaccta tcccttttaa atgtgtggca
      361 gtagccttaa ggggccaggt tgagggccag tgtctagagg agagcactgt tgtatccgcc
      421 cctgtatcta aaaggccctg aaattgtttg ccatcaagcc aaagagacat catgggtctt
      481 tcatcagtta atttttgcac ccaataaaca tctgaagagc caggggagga agaaccacgc
      541 ccctttactt tatgagggaa ctgccccatg aagggaagcg gttcagctca atcagaagag
      601 ccagtgttat tctgcaacat ctgagaatgt ccaagcacac agagactgca gaagtgctgc
      661 tggagaggag aggctgtgca ggggtcataa cgctcaacag acccaagtta ctcaacgctc
      721 tgagtctgaa tatgatccgg cagatctatc cgcagctaaa gaagtgggaa cgagacccag
      781 atacattcct gatcatcata aagggagctg gaggaaaggc cttctgtgct ggaggggaca
      841 tcaaagcact ctcagaagct aaaaaagcag ggcagacttt gagtcaagat ttattcagag
      901 aagaatatat cctgaacaat gccattgcgt cttgtcagaa accgtatgtt gcccttattg
      961 atggaatcac aatgggtggg ggagttggtc tttcagtcca tggtcaattc cgagtggcta
     1021 cagaaagatc tctctttgct atgccagaaa cgggaatagg actgtttcct gatgtgggcg
     1081 gaggttattt cttgccaaga cttcaaggaa aactgggtta cttccttgca ctgacaggat
     1141 tcagactaaa aggaagagat gtgcacagag cgggaatcgc cacacacttt gtagattcag
     1201 aaaagttgca tgtactggag gaggagttgt tagccttaaa gtccccttca gctgaggatg
     1261 ttgctggtgt cttagaaagc tatcatgcca agtccaagat gggtcaagac aagtctatca
     1321 tatttgagga acacatggac aaaataaaca gttgtttttc agccaatact gtggaacaga
     1381 ttcttgaaaa cttacggcaa gatggttcac cttttgctat ggaacagatt aaggttatta
     1441 ataaaatgtc tccaacgtca ctaaagatca cactaaggca gctcatggag ggctctacaa
     1501 agaccttgca agaagtactg accatggagt accggttaac tcaagcgtgt atggaaggtc
     1561 atgactttca tgaaggtgtt agagctgttc tcattgacaa agaccagact ccaaaatgga
     1621 aaccagctga tctaaaagat gttactgatg aagatttgaa tagttatttt aaatctctgg
     1681 gaagcaggga tttgaaattc tgaggtttat tttggagcaa gggtcagcac accatagcag
     1741 agacgccagg cctggcatct tggcccattt ttgtgcaacc tgcaagctgg aaatagtttt
     1801 cttgttttta aatgcttggg aaagaaatga aaagactaat gtttcataat acagtggttg
     1861 cctgaagttt aagcaccagt gtttataact tttcctgatg tgacagctaa agttcaaaca
     1921 ccaatgtttt atggagcctt cctgcagtgg agcggaactt gttccctatg gcttggagtg
     1981 gccatggcac agacttcatg acccacagca cctcaagtat ctaagtatct actgtgatct
     2041 tcgtcagaaa cggtttgctg gtccctggtt tataagaaaa ttaagagctc cagagaatcc
     2101 caagtcattt ctcattaaaa caatgactgt aatttctact ttatcagtaa ttaaccaaat
     2161 tatgtacaga ttatcagaat ccaaaccttg aaatttggag agggtatatt gatgccttat
     2221 aaattttctt tttaaacatt tcctacttta aaacaatatt gtagcagaag aattactttg
     2281 taaaca
//
