LOCUS       XM_039083286            2374 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 3-hydroxyisobutyryl-CoA hydrolase
            (Hibch), transcript variant X3, mRNA.
ACCESSION   XM_039083286
VERSION     XM_039083286.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2374
                     /gene="Hibch"
                     /note="3-hydroxyisobutyryl-CoA hydrolase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 7 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:301384"
                     /db_xref="RGD:1308392"
     CDS             640..1791
                     /gene="Hibch"
                     /codon_start=1
                     /product="3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
                     isoform X2"
                     /protein_id="XP_038939214.1"
                     /db_xref="GeneID:301384"
                     /db_xref="RGD:1308392"
                     /translation="MRELPHEGKRFSSIRRASVILQHLRMSKHTETAEVLLERRGCAG
                     VITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSE
                     AKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERS
                     LFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDSEK
                     LHVLEEELLALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSANTVEQ
                     ILENLRQDGSPFAMEQIKVINKMSPTSLKITLRQLMEGSTKTLQEVLTMEYRLTQACM
                     EGHDFHEGVRAVLIDKDQTPKWKPADLKDVTDEDLNSYFKSLGSRDLKF"
ORIGIN      
        1 tggccctctg gagcgcagcg gaagtgcagc ggtaggccgc tctggccctc cggaggaatt
       61 gtcagtgacc ctggctcttc taggttctgg tcggcggtgg gcgggtctga gaagtgcagg
      121 tggagttgct acgttctgct aattcatctc tagggtttta ggccatgggg cagcagtttg
      181 tgtggcggct ccagtcgagg ggtgttccaa ggcgaagtgg actgttcaag gtgcccttgt
      241 aataattgtt cctgcaccaa ctgtagggcc gcttgaacct tttcttgagg catggaccac
      301 tgatcgatcc agactggatc atttgacttc caagatattt tatcagcctg gagtgcagga
      361 ggaacagcgg tctctatgaa aaaaggtcag gagctttgaa ctttggagtg tatcctgtgt
      421 ttgacctatc ccttttaaat gtgtggcagt agccttaagg ggccaggttg agggccagtg
      481 tctagaggag agcactgttg tatccgcccc tgtatctaaa aggccctgaa attgtttgcc
      541 atcaagccaa agagacatca tgggtctttc atcagttaat ttttgcaccc aataaacatc
      601 tgaagagcca ggggaggaag aaccacgccc ctttacttta tgagggaact gccccatgaa
      661 gggaagcggt tcagctcaat cagaagagcc agtgttattc tgcaacatct gagaatgtcc
      721 aagcacacag agactgcaga agtgctgctg gagaggagag gctgtgcagg ggtcataacg
      781 ctcaacagac ccaagttact caacgctctg agtctgaata tgatccggca gatctatccg
      841 cagctaaaga agtgggaacg agacccagat acattcctga tcatcataaa gggagctgga
      901 ggaaaggcct tctgtgctgg aggggacatc aaagcactct cagaagctaa aaaagcaggg
      961 cagactttga gtcaagattt attcagagaa gaatatatcc tgaacaatgc cattgcgtct
     1021 tgtcagaaac cgtatgttgc ccttattgat ggaatcacaa tgggtggggg agttggtctt
     1081 tcagtccatg gtcaattccg agtggctaca gaaagatctc tctttgctat gccagaaacg
     1141 ggaataggac tgtttcctga tgtgggcgga ggttatttct tgccaagact tcaaggaaaa
     1201 ctgggttact tccttgcact gacaggattc agactaaaag gaagagatgt gcacagagcg
     1261 ggaatcgcca cacactttgt agattcagaa aagttgcatg tactggagga ggagttgtta
     1321 gccttaaagt ccccttcagc tgaggatgtt gctggtgtct tagaaagcta tcatgccaag
     1381 tccaagatgg gtcaagacaa gtctatcata tttgaggaac acatggacaa aataaacagt
     1441 tgtttttcag ccaatactgt ggaacagatt cttgaaaact tacggcaaga tggttcacct
     1501 tttgctatgg aacagattaa ggttattaat aaaatgtctc caacgtcact aaagatcaca
     1561 ctaaggcagc tcatggaggg ctctacaaag accttgcaag aagtactgac catggagtac
     1621 cggttaactc aagcgtgtat ggaaggtcat gactttcatg aaggtgttag agctgttctc
     1681 attgacaaag accagactcc aaaatggaaa ccagctgatc taaaagatgt tactgatgaa
     1741 gatttgaata gttattttaa atctctggga agcagggatt tgaaattctg aggtttattt
     1801 tggagcaagg gtcagcacac catagcagag acgccaggcc tggcatcttg gcccattttt
     1861 gtgcaacctg caagctggaa atagttttct tgtttttaaa tgcttgggaa agaaatgaaa
     1921 agactaatgt ttcataatac agtggttgcc tgaagtttaa gcaccagtgt ttataacttt
     1981 tcctgatgtg acagctaaag ttcaaacacc aatgttttat ggagccttcc tgcagtggag
     2041 cggaacttgt tccctatggc ttggagtggc catggcacag acttcatgac ccacagcacc
     2101 tcaagtatct aagtatctac tgtgatcttc gtcagaaacg gtttgctggt ccctggttta
     2161 taagaaaatt aagagctcca gagaatccca agtcatttct cattaaaaca atgactgtaa
     2221 tttctacttt atcagtaatt aaccaaatta tgtacagatt atcagaatcc aaaccttgaa
     2281 atttggagag ggtatattga tgccttataa attttctttt taaacatttc ctactttaaa
     2341 acaatattgt agcagaagaa ttactttgta aaca
//
