LOCUS       XM_039083285            2545 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 3-hydroxyisobutyryl-CoA hydrolase
            (Hibch), transcript variant X2, mRNA.
ACCESSION   XM_039083285
VERSION     XM_039083285.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2545
                     /gene="Hibch"
                     /note="3-hydroxyisobutyryl-CoA hydrolase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:301384"
                     /db_xref="RGD:1308392"
     CDS             811..1962
                     /gene="Hibch"
                     /codon_start=1
                     /product="3-hydroxyisobutyryl-CoA hydrolase, mitochondrial
                     isoform X2"
                     /protein_id="XP_038939213.1"
                     /db_xref="GeneID:301384"
                     /db_xref="RGD:1308392"
                     /translation="MRELPHEGKRFSSIRRASVILQHLRMSKHTETAEVLLERRGCAG
                     VITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSE
                     AKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERS
                     LFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDSEK
                     LHVLEEELLALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSANTVEQ
                     ILENLRQDGSPFAMEQIKVINKMSPTSLKITLRQLMEGSTKTLQEVLTMEYRLTQACM
                     EGHDFHEGVRAVLIDKDQTPKWKPADLKDVTDEDLNSYFKSLGSRDLKF"
ORIGIN      
        1 tctggggtga tctttttccc agcatcagta aaagttattg taagagggtt gcaccagccc
       61 ttggaaggct cagtgttccg gcattcctgg gttagagtac tgtttctgtt agaattgtgc
      121 cacccctttt ttactgtgat ataatcccaa gaggaggtag gtttccagta tgcgtctcct
      181 gtggtttcac acccccagga ggcacaatag aattgatccc tgtatccaca cttatagttt
      241 agggagcgat ctctgtggga tccgggacag acataaaagt cagtttccct aatgttggtg
      301 cgtcgatgga cagtgtcaca accgacatat ctttcattaa aactagaccc atgaggggct
      361 tcaattaggg gggtgttcca aggcgaagtg gactgttcaa ggtgcccttg taataattgt
      421 tcctgcacca actgtagggc cgcttgaacc ttttcttgag gcatggacca ctgatcgatc
      481 cagactggat catttgactt ccaagatatt ttatcagcct ggagtgcagg aggaacagcg
      541 gtctctatga aaaaaggtca ggagctttga actttggagt gtatcctgtg tttgacctat
      601 cccttttaaa tgtgtggcag tagccttaag gggccaggtt gagggccagt gtctagagga
      661 gagcactgtt gtatccgccc ctgtatctaa aaggccctga aattgtttgc catcaagcca
      721 aagagacatc atgggtcttt catcagttaa tttttgcacc caataaacat ctgaagagcc
      781 aggggaggaa gaaccacgcc cctttacttt atgagggaac tgccccatga agggaagcgg
      841 ttcagctcaa tcagaagagc cagtgttatt ctgcaacatc tgagaatgtc caagcacaca
      901 gagactgcag aagtgctgct ggagaggaga ggctgtgcag gggtcataac gctcaacaga
      961 cccaagttac tcaacgctct gagtctgaat atgatccggc agatctatcc gcagctaaag
     1021 aagtgggaac gagacccaga tacattcctg atcatcataa agggagctgg aggaaaggcc
     1081 ttctgtgctg gaggggacat caaagcactc tcagaagcta aaaaagcagg gcagactttg
     1141 agtcaagatt tattcagaga agaatatatc ctgaacaatg ccattgcgtc ttgtcagaaa
     1201 ccgtatgttg cccttattga tggaatcaca atgggtgggg gagttggtct ttcagtccat
     1261 ggtcaattcc gagtggctac agaaagatct ctctttgcta tgccagaaac gggaatagga
     1321 ctgtttcctg atgtgggcgg aggttatttc ttgccaagac ttcaaggaaa actgggttac
     1381 ttccttgcac tgacaggatt cagactaaaa ggaagagatg tgcacagagc gggaatcgcc
     1441 acacactttg tagattcaga aaagttgcat gtactggagg aggagttgtt agccttaaag
     1501 tccccttcag ctgaggatgt tgctggtgtc ttagaaagct atcatgccaa gtccaagatg
     1561 ggtcaagaca agtctatcat atttgaggaa cacatggaca aaataaacag ttgtttttca
     1621 gccaatactg tggaacagat tcttgaaaac ttacggcaag atggttcacc ttttgctatg
     1681 gaacagatta aggttattaa taaaatgtct ccaacgtcac taaagatcac actaaggcag
     1741 ctcatggagg gctctacaaa gaccttgcaa gaagtactga ccatggagta ccggttaact
     1801 caagcgtgta tggaaggtca tgactttcat gaaggtgtta gagctgttct cattgacaaa
     1861 gaccagactc caaaatggaa accagctgat ctaaaagatg ttactgatga agatttgaat
     1921 agttatttta aatctctggg aagcagggat ttgaaattct gaggtttatt ttggagcaag
     1981 ggtcagcaca ccatagcaga gacgccaggc ctggcatctt ggcccatttt tgtgcaacct
     2041 gcaagctgga aatagttttc ttgtttttaa atgcttggga aagaaatgaa aagactaatg
     2101 tttcataata cagtggttgc ctgaagttta agcaccagtg tttataactt ttcctgatgt
     2161 gacagctaaa gttcaaacac caatgtttta tggagccttc ctgcagtgga gcggaacttg
     2221 ttccctatgg cttggagtgg ccatggcaca gacttcatga cccacagcac ctcaagtatc
     2281 taagtatcta ctgtgatctt cgtcagaaac ggtttgctgg tccctggttt ataagaaaat
     2341 taagagctcc agagaatccc aagtcatttc tcattaaaac aatgactgta atttctactt
     2401 tatcagtaat taaccaaatt atgtacagat tatcagaatc caaaccttga aatttggaga
     2461 gggtatattg atgccttata aattttcttt ttaaacattt cctactttaa aacaatattg
     2521 tagcagaaga attactttgt aaaca
//
