LOCUS       NM_001399167            1320 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus hes family bHLH transcription factor 6 (Hes6),
            mRNA.
ACCESSION   NM_001399167 XM_006245407
VERSION     NM_001399167.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1320)
  AUTHORS   Cossins,J., Vernon,A.E., Zhang,Y., Philpott,A. and Jones,P.H.
  TITLE     Hes6 regulates myogenic differentiation
  JOURNAL   Development 129 (9), 2195-2207 (2002)
   PUBMED   11959828
REFERENCE   2  (bases 1 to 1320)
  AUTHORS   Bae,S., Bessho,Y., Hojo,M. and Kageyama,R.
  TITLE     The bHLH gene Hes6, an inhibitor of Hes1, promotes neuronal
            differentiation
  JOURNAL   Development 127 (13), 2933-2943 (2000)
   PUBMED   10851137
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Jan 4, 2022 this sequence version replaced XM_006245407.4.
            
            Sequence Note: The RefSeq transcript was derived from the reference
            genome assembly. The genomic coordinates were determined from
            alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643295.36373.1,
                                           SRR26643287.23279.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840106, SAMN12840108
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-178               JAXUCZ010000009.1  99450919-99451096   c
            179-265             JAXUCZ010000009.1  99450756-99450842   c
            266-347             JAXUCZ010000009.1  99450594-99450675   c
            348-1320            JAXUCZ010000009.1  99449383-99450355   c
FEATURES             Location/Qualifiers
     source          1..1320
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q36"
     gene            1..1320
                     /gene="Hes6"
                     /note="hes family bHLH transcription factor 6"
                     /db_xref="GeneID:316626"
                     /db_xref="RGD:1312047"
     exon            1..178
                     /gene="Hes6"
                     /inference="alignment:Splign:2.1.0"
     CDS             98..772
                     /gene="Hes6"
                     /note="hairy and enhancer of split 6"
                     /codon_start=1
                     /product="transcription cofactor HES-6"
                     /protein_id="NP_001386096.1"
                     /db_xref="GeneID:316626"
                     /db_xref="RGD:1312047"
                     /translation="MAPPQAPNRDRAGQEDEDRWEARGDRKARKPLVEKKRRARINES
                     LQELRLLLAGTEVQAKLENAEVLELTVRRVQGALRGRAREREQLQAEASERFAAGYIQ
                     CMHEVHTFVSTCQAIDATVSAELLNHLLESMPLREGSSFRDLLGDSLAGLPGGSGRSS
                     WPPGGSPESPLSSPPGPGDDLCSDLEEIPEAELNRVPAEGPDLVPTSLGILTTARRAQ
                     SVWRPW"
     exon            179..265
                     /gene="Hes6"
                     /inference="alignment:Splign:2.1.0"
     exon            266..347
                     /gene="Hes6"
                     /inference="alignment:Splign:2.1.0"
     exon            348..1320
                     /gene="Hes6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agactgggga tagctagtga ggcctctggg ctgcgaccta cctcgcagag gggtttgcac
       61 taaggcgctg ggcgccgggc tccgggcgct gtggaccatg gctccgcccc aggcgcccaa
      121 cagggaccgt gcaggccagg aggatgagga ccgttgggaa gcacgggggg accgcaaggc
      181 ccggaagccc ctggtggaga agaagcgacg cgcgcggatc aacgagagtc ttcaggagtt
      241 gcggctgctg ctagcgggca ccgaggtgca ggccaagcta gagaacgccg aggtgctgga
      301 gctgaccgtg cgacgcgtgc agggcgctct gcgaggccgg gctcgcgagc gggagcagct
      361 gcaggctgaa gcaagcgagc gcttcgctgc tggctacatc caatgcatgc atgaggtgca
      421 cacgttcgtg tccacgtgcc aagccatcga tgccactgtc tcagctgaac tcctgaacca
      481 cctgctagag tccatgccgc tgcgcgaggg tagcagcttt cgggatctgc tgggggactc
      541 cctagctggg ctgcccggag gctctgggag gagcagctgg cctccaggag ggtccccaga
      601 gtccccattg tccagtcccc caggtcccgg ggacgacctg tgttctgacc tagaggagat
      661 cccggaggct gaactaaacc gggtgcctgc cgaggggcca gatttggtgc ccacatcctt
      721 aggcatcctg accacagctc gccgggccca gagtgtgtgg agaccttggt gaccaacact
      781 taccagggac ctgtgaatgg tgggtgggct gccatcctta agtttgcttc cttcttggct
      841 atcagatgag gtggagatag cccaggataa cccccagata tgccttcccc actgtccaat
      901 gaatggatgg cttgtatggt aaccctgatg accagcccct gcaggtccct agcactattt
      961 tgtgagggaa tcaatttcat ggaccctaga gctctggatg ggggccaggg tgggggtggg
     1021 ggaggacact acagaaagaa gggagactcc tgtagtgcta ccaggactcc ctcatgttca
     1081 cctttcccta ggatctaggg cagaagtggc caatcttgag gctgagcatg agtgtcctgg
     1141 gcagggacac acaggccata gcagtcctga cctgaataga agttcagatt tgctactctg
     1201 gctaggagac caggagaggc aagcatattc cgcagtcact gagaggtgct ccctgtttgt
     1261 aacagttgtg tgtgtgaatg tggttgccgt cggatgttcc aattaaataa agaactctgg
//
