LOCUS       XM_008771272             811 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus helt bHLH transcription factor (Helt),
            mRNA.
ACCESSION   XM_008771272
VERSION     XM_008771272.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008771272.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008771272.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..811
                     /gene="Helt"
                     /note="helt bHLH transcription factor; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 68% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:498633"
                     /db_xref="RGD:1564073"
     CDS             1..726
                     /gene="Helt"
                     /codon_start=1
                     /product="hairy and enhancer of split-related protein
                     HELT"
                     /protein_id="XP_008769494.1"
                     /db_xref="GeneID:498633"
                     /db_xref="RGD:1564073"
                     /translation="MSDRLKERKRTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQ
                     SSGKLEKAEILEMTVQYLRALHSADFPRGREKAELLAEFANYFHYGYHECMKNLVHYL
                     TTVERMETKDTKYARILAFLQSKARLGAEPAFPPLSLPEPDFSYQLHPAGPEFPGHSP
                     GEATVFPQGATPGSFPWPPGAARSPALPYLSSATVPLPTPAQPHSPFLAPMQGLDRHY
                     LNLIGHGHPNTLNLHTPQHPPVL"
ORIGIN      
        1 atgtctgaca ggctcaagga acgcaaaaga accccggttt ctcataaagt gatcgaaaag
       61 cgaaggaggg accgaattaa ccgctgcttg aacgaactgg gcaagacagt ccccatggcc
      121 ctggcaaaac agagttccgg gaaactggag aaggcggaga tcctggagat gacagttcag
      181 tacctcagag ctctgcattc cgcggatttt ccccggggaa gggaaaaagc agagctttta
      241 gcagagtttg ccaactactt ccactatggt taccatgagt gcatgaagaa cctggtgcac
      301 tacctcacca ccgtggagcg gatggagacc aaagacacca agtacgcgcg catccttgcc
      361 ttcttgcaat ccaaggctcg cctgggcgcg gagcccgcct ttccgccgct ctcgctcccg
      421 gagccggatt tctcctatca actgcatcca gccggcccag agttcccggg ccacagcccg
      481 ggcgaagcca cagtgttccc gcagggggct accccaggtt cattcccttg gcctcctgga
      541 gcggcccgca gcccagcact gccttacttg tccagcgcga ccgtacctct ccccactccc
      601 gcacagcccc acagcccctt cttggctccg atgcagggcc tggaccggca ttacctaaat
      661 ctgatcggcc atggccaccc caacaccctc aacctgcaca cgccccagca ccctccggtg
      721 ctctgacacc cactcaccgc atagattact ttgcgatttg gtgccagttt gagacgatgt
      781 atatgttgta cgtgtgtaaa tagtgcgcta a
//
