LOCUS       XM_006247018            3702 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus HEAT repeat containing 9 (Heatr9),
            transcript variant X1, mRNA.
ACCESSION   XM_006247018
VERSION     XM_006247018.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006247018.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006247018.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3702
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3702
                     /gene="Heatr9"
                     /note="HEAT repeat containing 9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     1 Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:497970"
                     /db_xref="RGD:1559875"
     CDS             1911..3614
                     /gene="Heatr9"
                     /codon_start=1
                     /product="protein HEATR9 isoform X1"
                     /protein_id="XP_006247080.1"
                     /db_xref="GeneID:497970"
                     /db_xref="RGD:1559875"
                     /translation="MGHEKQVNFSQFPKPMFNYPWLDYRNRNKKFRKAMAPVHLPLSC
                     YKLPKEAFPPSPECWREHPSRPNATPCLHLKKHPDLITHWSTLYDQRKERESKKMLWR
                     RRNLTSSQLSNLHVSISKLTLKPKVERSLLDATKDPLKWQRLKELTNSLNSPQEDEQC
                     YAAYALGNLGVNKKFVMESLQQAARTGSAKVKAEIYKALAILGCLDKSVVKALIKQLM
                     EQKESQRLETLVVLRVALNAWAAVPKSKRPKFGNEEKLVPLLQTLIDKSLNEEESLEA
                     ALCLGFLRPSNSMVQQFLIQCLCQGSMPQRMKALRMLVKMMNVHSAAVTRAILDQLHS
                     NVIDDRLEATQMLKTIGLEKIQAQGLEELTFDLLKKKMHNEPFQVMRQAVSETVDVLK
                     MKPLIMKLMEEQLMSPDVTERQEAIISLGALGFRNEQVFHLLLDMLDADETKTVKKSI
                     QETLLIWASRNPWIRNKLTNKVFFVYDVPKTVKVEPTRFQKEPESLDNLCITDFRRVK
                     LSTLSIAKSCNKLGGKLEAPAFSFYFSKPKKEMPKATGPWEPKIRQQLRNLVLSQNRF
                     V"
ORIGIN      
        1 tgtgtgtgtg tgtgtggtgg tggtgggggc ttcctatgta gccctaagtt gcctaactcc
       61 ctatgtagac tagggtctcc tggaccctaa cccctccatc ttcagtgctg agcctacacg
      121 gctgacccac catgcccagc catttgtttt gtttattgaa gcaggatctc aggacacagc
      181 ccaggctggc cttgagcttt caggatgaga ttacaagtgt ttgccacatc gcctggctta
      241 acaacgtcat cttttttcat ccttaagggc atcgaaattg tttaattata ttctgtagag
      301 tatttatcat ttagatttag ttatttcctt acagttgggc tcagattaag taactgtggt
      361 aggaattcca cttgagaatg ttatcttcct ccacgcagca catgagcgct cttgtgtcag
      421 tttatttata taaaatgtga ttaaatgatg atcaagccaa tgatccatac ttttttttag
      481 atgttttatt cttctttatg tatattagtg ttttgaaagc ttacatgtat gtgcaccagt
      541 gtggttcctg ctggattccg tgtaactcgg taatagatcg tggtcaacca ctatgtgggg
      601 gctgggaaca gaactcacgt cttctgcaag agcaacaagt acccttggcc agtaagccac
      661 atctgtagcc ccaacgattc atattttctt ggtctgtaat gtgatggtta atcttcggtc
      721 accaagactg aatggatctg aatgaattaa accactggcc ggccatacct ggaagagatt
      781 cccctttatc tttttttaaa gatgaattaa agaatcatat atttatttta tttgtatgaa
      841 tgttcgcctg cgcacatgtg tgccacatgt gttcttggtg cacagaggtc aaaagagggc
      901 actagaccct cggaactgaa gtcacacact attgtaaatt gccaagtagg tgctgggaac
      961 caaagtcaag tcttccctgc cgatcttaac tgctgtgcta cccctccagc cccttgataa
     1021 tcttattagc agtaggaaga tctatctata atgtgggcaa cagcatctca ggggccaggc
     1081 tctggacagg atggggagag tgtgttctgt gctgtcactg tgactggcca ggctgttgac
     1141 acttctctgc cacagtggat tgtaaccact gtgaaataaa ataacacttc aacccttaag
     1201 ttgcctttgt gagagcattt taatcatagc atcagaaaac aaaacaaggc acatagtagg
     1261 tttcttactg tacactgaca tgtcagtacc gtgctaggta cttgggtgaa gtaagaaagg
     1321 gattacatca cttagtcagg tggggagggg agcttgggaa aggaaagcct tcagaaatgg
     1381 cataacattg gtatgaatct gaaagatctg agtgacagtt tgacaggcag gaagggaggg
     1441 aaaagggtac aaggtaggag gaacagcata tgcaaacaga agagatctga agggcatccg
     1501 gccagagcgg aaggatgtgc ataaaagagg ccttcctgtc cctgtcattt tcctgatgac
     1561 caattctgtg aacaactcct gcacttaacg tgggttgact cgaatttgat ggttcataaa
     1621 cactctgtac ctcaccaaag ccactgaagt tgagcagaca tgacttggct attctgctga
     1681 aggaaatgaa gctcagtgag cagctctgtc aggaggccaa caggagccag cactgggact
     1741 caacaatgga aatgggtgtt ctgttcacca tggaaacctg attgcccagc actcacatgc
     1801 ctccctggcc tcacttatac cagagatcct cctcaatttc tgctatcttt gcttcacatc
     1861 cctgaacttt tttggctgtc ctgggtctcc tctggcctac actaaagagc atgggccatg
     1921 aaaaacaggt taatttctct caattcccca agccaatgtt caactaccca tggctggact
     1981 atcgaaacag gaacaaaaaa ttcagaaaag ccatggctcc tgttcacctg cccttgtcct
     2041 gttacaagtt gccaaaggaa gcatttcccc caagtccaga gtgctggagg gagcatccaa
     2101 gcaggccaaa tgccacgcct tgcctccacc tcaaaaaaca ccccgatctc atcacacact
     2161 ggagcaccct ctatgaccaa cgcaaagagc gggagtcaaa aaagatgtta tggagaagaa
     2221 gaaaccttac aagttcccaa ctatcaaacc tacatgtctc tatcagcaag ttgactttaa
     2281 agcctaaggt ggaacgcagt ttgttagatg ccaccaaaga ccccctgaag tggcaaagac
     2341 taaaggaact taccaacagc ttgaactctc cacaagagga tgagcagtgc tatgcagcct
     2401 atgctttagg gaacctgggc gtcaacaaga agtttgtcat ggaatcactg cagcaggcgg
     2461 ctcgaactgg ttcagcaaaa gtgaaggccg agatctataa agccctagcc atcctaggtt
     2521 gcttggataa gtctgtggtc aaggctctca tcaaacagtt gatggaacaa aaggaaagtc
     2581 aaaggttgga gaccctggtg gtgctacgag tagcgctgaa cgcctgggct gctgtgccta
     2641 agagcaagag gccaaaattc ggaaatgagg aaaagctggt gcctttgctg cagactctga
     2701 tagacaagtc actgaatgaa gaagaatcct tagaggcagc cctgtgcttg ggtttcctga
     2761 ggcccagcaa cagcatggtc caacagttct tgatacaatg tctgtgccaa gggtccatgc
     2821 cccagaggat gaaggcactg aggatgctgg tcaagatgat gaacgttcac tcagctgctg
     2881 tcaccagggc cattctggat cagctacact ctaacgtcat tgacgatcgc ttggaagcca
     2941 cccagatgct caagaccatt gggttggaga agatccaggc acaggggctg gaggaactca
     3001 catttgacct gctcaagaag aaaatgcaca atgaaccctt ccaagtaatg aggcaggcgg
     3061 tgtctgaaac agtggatgtg ctcaagatga agcctttaat aatgaaacta atggaggagc
     3121 aactgatgag cccagatgtc actgagcgcc aagaagcaat catctctttg ggtgccctgg
     3181 ggttccgcaa cgaacaggtg ttccatttgc tgctggacat gctagatgca gatgagacca
     3241 agaccgtgaa gaagagcata caagaaacac tacttatttg ggcctcaaga aatccatgga
     3301 tccgaaacaa gctgaccaac aaagttttct ttgtgtacga cgtaccgaag actgtgaagg
     3361 tagagcctac gaggttccag aaggagccag agagcctaga caacttgtgt atcacagact
     3421 ttcgacgggt taagctgagc actttgtcta tagccaagtc ctgcaacaag ctagggggaa
     3481 agctagaggc acctgctttc tcattctatt tctccaaacc aaaaaaggag atgccaaagg
     3541 ccacagggcc ttgggaacca aaaatcaggc aacaactccg gaacttggtg ttgtctcaaa
     3601 ataggtttgt ttagggggtc tgattccaac tctttccttc aggatggttt cctgaggaga
     3661 caattcattt ttctccttta tgaatgaata cttgtcactt ta
//
