LOCUS       XM_006240360            3431 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus HEAT repeat containing 4 (Heatr4),
            transcript variant X2, mRNA.
ACCESSION   XM_006240360
VERSION     XM_006240360.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006240360.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3431
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3431
                     /gene="Heatr4"
                     /note="HEAT repeat containing 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     5 Proteins, and 99% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:500692"
                     /db_xref="RGD:1566220"
     CDS             187..3327
                     /gene="Heatr4"
                     /codon_start=1
                     /product="HEAT repeat-containing protein 4"
                     /protein_id="XP_006240422.1"
                     /db_xref="GeneID:500692"
                     /db_xref="RGD:1566220"
                     /translation="MTKPKKKKGSSFCCLEPRPPRLGWGMVFLHSKTKDKAECASVSR
                     VPPVFHFNPRHCEQLKNHYLKSAAANLSFSQDVRWQRGLPSMPFSQYSFKHIYNTEDI
                     VPPLQTRKIQTKKPERTRILYTTTLLPEVITHFTKTYTSTLFPEDFTGFAKTQKSDGS
                     KKVKPKPEGPEQKAFPGQSRYHKLKPYLLDLTPSLDESLEERETWLPPAEKEARGWEA
                     IVLEKLDKRTSRWIQSKRPVRPGQSPNKWQPFLRQQYDWSHIRDELTSSSDLELLKKL
                     EAEETAEFMGESAPPPPKEIKKPELLLPVYFRLPGYSPQVYAAETLGNNMTAKWILEE
                     RSNIQYLPKNPFRQVNPKAGEYAYSTDNAFEQEIYFDGVKIVHQIGGRKDQIVLENLN
                     RYDKHLTKVFPETPEKWSLQPFPEMPYKFKKGVQRWTALPTQAKGLLLQVGEEDSSAK
                     TRRQKKQVTPLKENVTWELTVLRKMLQEWKTSWALIIEWHHETVENLLRGIQSMYDDI
                     RIQAITTCATAVLERPRVAANPEDPGPIIVDLPEVLLSALETALSDSNPNVRMAAAIC
                     QYSIQSHNPTAQDIMETALTKGNSVDSWAAAQCLALAGIATYPVIKRILHQLFYKNNE
                     ATERQACELLNHLRVNSTLIHTMLAVELNSRQWRDRIVACRAFSQISGKVCIDMKQKI
                     IQLMWNDWNKEVRQAAAKALGQMNLGKEVHDMIRIKLCQGNSQERIKALSLIRGLKIM
                     TAKLLPSFLTCLSDEFTGIRQAACLAAGALKIRDEMVLERLLNLMLTDPYWKIKAFAI
                     RALGQIGQVSPQLTNNLLWAIHYEDAPGVRLEACRSIQALNLQGNKVRDTFLDVLLLE
                     KHEAVLREIDQTMTVLNLEKEGNQEMIQEIKNKIQTLNQKDLLTEKILKIELAIQNLK
                     KTAKWVYSQPKEGQKPLEFYTFLQNFKTSQSEEALLRPEVLDTEKIIKNVMPRVPNPW
                     LQSPVVGLPTHRNRSPYFRDLRTAREKRIERGPFGYDPVLQSDSFLKEDCLPTPSLLS
                     FRGSQLLSRLNDSSDL"
ORIGIN      
        1 gcagagtcaa gaatgtgatt gcaattgagt ttcatcgcgt cgtggagtaa tagacacttg
       61 ttactaatct taggactgtt ctttcaaaaa tgtgcatcat gctgttttgt gtgctgtctg
      121 cgcgtgctta gcctacacgc tctgcttgtg aaccagaagt gtggacagaa agatttgaag
      181 ggagacatga ccaagcccaa aaagaaaaag ggctcctcct tctgctgcct cgagccacgg
      241 ccccctcggc tgggatgggg catggtcttc cttcactcaa aaaccaaaga caaggcggag
      301 tgtgcctccg tctccagagt gccacctgtc ttccacttca acccacggca ctgcgagcaa
      361 ctcaaaaacc attatttgaa aagtgcagcc gccaaccttt ccttctctca agatgtgagg
      421 tggcagcgag gactgcccag catgcctttc agccagtaca gttttaagca catctacaac
      481 acagaagaca tcgtaccacc tctgcagacc agaaagatcc aaactaagaa acccgagcgc
      541 actaggattc tgtatactac aaccctcttg ccagaagtca tcactcactt tacaaagaca
      601 tatacctcaa ccctctttcc ggaagacttc actggctttg caaagacaca aaagtctgat
      661 ggttctaaaa aagtgaaacc aaagccggaa ggcccggagc agaaagcatt tcctggacaa
      721 agtcgctatc acaaattaaa gccatatctg ctggacctga caccctctct agatgagagt
      781 ctggaagaaa gggaaacctg gcttccacct gctgagaagg aagcccgagg ctgggaagcc
      841 atcgtgctgg agaagctgga caagcgcacc tcacgatgga tccagagcaa acgaccagtg
      901 agaccgggac aatcgcccaa caaatggcag ccctttctgc gccagcagta cgactggagc
      961 cacattcggg atgagctcac ttcgtccagt gacttggagc tcctcaaaaa actggaagca
     1021 gaagagacag cagagtttat gggtgaaagt gccccgccgc caccaaagga aataaagaaa
     1081 ccagagctgc tgcttccggt ttactttagg ttacctggct actccccaca agtatacgct
     1141 gctgaaaccc tcggcaacaa catgacagcc aagtggatcc tagaagagag aagcaacatc
     1201 cagtatctcc ctaagaaccc cttccggcag gtgaacccca aagctggaga atatgcttac
     1261 tctacagaca atgcctttga gcaggagatt tactttgatg gagtgaagat cgttcaccag
     1321 attggtggga ggaaagacca aattgtcctg gaaaacctca atcggtatga caagcacctg
     1381 actaaggtct tccctgaaac cccagagaag tggagcctcc agccttttcc tgaaatgcct
     1441 tataaattca agaaaggagt ccagcgttgg actgcactgc caacccaggc caagggcctt
     1501 ctgctgcaag taggggagga agactcgtct gccaagacta ggagacaaaa gaagcaggtc
     1561 acacccctga aggagaatgt tacttgggag ctgacagtcc tgaggaagat gctgcaagag
     1621 tggaagactt cctgggcact cattattgaa tggcatcatg agacggtgga gaacctacta
     1681 cggggcatac aaagcatgta cgatgacatt aggatccagg ccatcaccac atgtgctact
     1741 gctgttttag aaaggccccg ggttgccgcc aacccggagg acccaggacc aatcattgtg
     1801 gacttgccag aggtccttct gtccgcttta gagactgctc tgtccgacag caatccgaat
     1861 gtgaggatgg cagcagcaat atgccagtat tccatacagt cacataatcc cactgcccag
     1921 gacatcatgg agacagccct cacgaagggt aacagtgtgg acagctgggc tgcagcgcag
     1981 tgcttggccc tggcaggcat cgccacctat ccagtgatta agaggattct ccaccagctt
     2041 ttctacaaga ataacgaggc taccgagaga caggcttgtg agctcctgaa ccatctcagg
     2101 gttaattcga ccctgatcca cacgatgctt gctgtggagc tgaacagcag gcaatggagg
     2161 gaccgcatcg tggcctgccg tgctttctct cagatcagtg gaaaagtctg catagatatg
     2221 aaacagaaaa taatccagct gatgtggaat gactggaaca aggaagtaag gcaggccgct
     2281 gccaaagccc tggggcaaat gaatcttggc aaagaagtac atgacatgat cagaattaaa
     2341 ctgtgccaag gaaattccca ggagcggatc aaggccctct ccctgatccg agggcttaaa
     2401 atcatgaccg ccaagctcct cccaagcttc ctgacctgcc tctctgatga gttcacggga
     2461 attcgacagg cagcttgctt ggcagcaggt gccttaaaga tccgtgacga gatggtgctt
     2521 gaacgcctcc tgaatctgat gctcacagat ccttactgga aaatcaaggc ttttgccatt
     2581 cgagctttgg gacagattgg acaagtgagt ccccagctaa caaataacct gctctgggct
     2641 atccactacg aagacgctcc aggagtacgg ctggaagctt gccggagcat ccaagccctt
     2701 aaccttcaag ggaacaaggt cagggacact ttcttagatg tgctgctcct ggaaaagcac
     2761 gaggctgttc ttagggaaat tgaccagaca atgacagtac ttaacttaga gaaagaagga
     2821 aatcaagaaa tgatccagga gatcaagaac aagatccaaa cactaaacca aaaggacttg
     2881 ctgacagaga aaatactgaa gattgaactg gccatacaaa acttgaaaaa aacagctaaa
     2941 tgggtttact cgcaacccaa ggagggccag aaaccactgg aattctacac ttttcttcaa
     3001 aacttcaaaa cttctcagag tgaagaggct cttctcaggc ctgaggttct cgacactgaa
     3061 aaaatcataa agaatgtgat gcccagggtg ccaaacccct ggctccagag tcccgtcgtc
     3121 gggctcccca cacacagaaa ccgctcaccg tatttcaggg acctacggac tgcccgggaa
     3181 aaaaggattg aaagaggacc cttcggatat gacccggttt tgcagtcgga ctcattcctc
     3241 aaagaagatt gtcttccaac accaagtctt ctttcctttc ggggaagcca gctcctgtct
     3301 aggctgaatg actcttctga tctttgacac tggcagaagt ggacaaggca tgttctgtca
     3361 tttccactga tactcaacga tgttctcagt atgtttacaa agataaagta cttacttatc
     3421 aatcaacttt a
//
