LOCUS       XM_341654               3403 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus HEAT repeat containing 3 (Heatr3),
            transcript variant X1, mRNA.
ACCESSION   XM_341654
VERSION     XM_341654.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_341654.10.
            
            On Jan 21, 2021 this sequence version replaced XM_341654.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3403
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3403
                     /gene="Heatr3"
                     /note="HEAT repeat containing 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 23 ESTs, 4 long SRA reads, 5 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 185 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:361375"
                     /db_xref="RGD:1308267"
     CDS             158..2206
                     /gene="Heatr3"
                     /codon_start=1
                     /product="HEAT repeat-containing protein 3 isoform X1"
                     /protein_id="XP_341655.3"
                     /db_xref="GeneID:361375"
                     /db_xref="RGD:1308267"
                     /translation="MGKSRTKRFKRPQFSPVGSCQAEAAATANGTGDEEDDGLAAELL
                     EKLQHPSAEVRECACAGLARLVQQRPALPDLARRDAVRRLGPLLLDSSLAVRETAAGA
                     LRNLSACGGFDVCDDMVAKDIMTPLVALLRECSSGLDSNEMSPQEKADKKRNSIESIA
                     NEAVNVLWNVCECSSRAVSIFNKEGCLEIVLQYLRRFPTSIDLAVSVAYCLQTVTEDN
                     PELLKSFDGTALRVLESALLCPVTSMEYILLKTLVAGTIWNLKDIIPSKSQAEIINAI
                     LNTLSEVLGVNAGDTVIQMKEAETQRLKDAAESEDILANANGDGEMEFQDDEMEEIPH
                     KRKLRRKTFISDLLPSTDKELREAMALLTAQQTALEVIVNMCCSEDPSDDEWEELSSS
                     DESEAFMENSFNECSGQLMSPLCLSHEIHSALTNCLIPKKVFEKTSSPNSDAVDICSK
                     NPTWKPLIRKMSTIQCRALMCLQSLVSLLDIDHLGGAPALQTLAQHLSQLLFSQPDFA
                     KHADFLEAISSALRALLQTMASKNIPQCMTPEQLMTLCREGIHSSSIGVRVNVVSILG
                     ITGSVLAKEDGTLETLKTIGCFLLEVTTKDPSLVVAGEALDALFDVFADGEEAEKASV
                     QIKLLAALKEFQPVFKMKMRKEGRARYSPDQLCVLDNVKMNLRRFIAYQETVEKRLTS
                     "
ORIGIN      
        1 cgctgctttc ccatgtgtac ctagaccgtc tcatccgacc agctgaagag agacgccaag
       61 taacgtcgga gactagaagt tgcccagggc ccggcgggcc ccatcgactg ctgctgcagt
      121 attcctcctc tgatctacca ccgcagcctc tgtcgccatg ggtaagagtc ggacgaagcg
      181 cttcaagcga cctcagttct cccctgtagg tagctgtcag gccgaggcgg cggcaacggc
      241 gaacgggact ggggacgagg aggacgacgg gctggcggcg gagcttctgg agaagctcca
      301 gcacccgagc gccgaggtcc gcgagtgcgc ctgcgcggga ctggcccggc tagtgcagca
      361 gcggccggca ctaccagact tagcccgccg ggatgccgtg cggcggcttg ggccgctgct
      421 gctggactca agtctagcgg taagggagac ggcggccgga gctctgagaa acctcagtgc
      481 ttgtggaggt tttgacgttt gtgatgacat ggtggctaag gacatcatga cacccctggt
      541 ggcactacta agagagtgta gctctggact ggattccaac gagatgtctc cacaggagaa
      601 agccgataag aaaagaaact ctatagagag catagccaat gaggctgtga atgtgttatg
      661 gaacgtatgt gaatgcagta gtagagcagt atccattttc aacaaagaag ggtgtttgga
      721 gattgtgtta cagtacttac gtcgcttccc caccagcatt gatctggctg tctccgtagc
      781 ctattgttta cagacagtga cagaagataa tccagagctc ctgaaatctt ttgatggcac
      841 agcactgcgt gtactggagt ctgctttgct ttgtcctgtc acctctatgg aatacattct
      901 tctaaagaca ctggtggcag gcacaatctg gaacctaaag gacattattc cgtctaagag
      961 ccaggcagaa atcataaatg ccatcctaaa cacgttgtct gaagttctgg gggtgaatgc
     1021 tggcgacaca gtcattcaga tgaaggaggc tgaaacccag cgactaaagg atgccgcaga
     1081 gagcgaggac atactagcca atgccaacgg cgatggtgaa atggaatttc aagatgatga
     1141 aatggaagaa attcctcata aaagaaaact cagaaggaaa acgtttattt ccgatttact
     1201 tccatctact gacaaggagc tgagagaggc catggcgttg ctgaccgctc agcagactgc
     1261 tctggaggtt attgtcaaca tgtgctgcag tgaagatccc tccgatgatg agtgggaaga
     1321 gctttctagt agcgatgaaa gtgaagcctt tatggaaaac tccttcaatg agtgcagtgg
     1381 acagctgatg tccccattgt gcctgtccca tgagattcac tctgccctta ccaactgcct
     1441 cattccaaag aaagtttttg agaaaacatc gtcaccaaac agtgatgcag ttgacatatg
     1501 ttctaagaac cctacttgga aacctttgat taggaaaatg agcaccattc agtgtagagc
     1561 ccttatgtgt ctccagagtc ttgtgtctct cctggacata gaccatctcg gtggagcccc
     1621 agcccttcaa acacttgctc agcacctgtc gcagcttctt ttttctcagc cagattttgc
     1681 taaacatgct gattttctag aagccataag tagtgctttg agggcccttt tgcaaacaat
     1741 ggcctccaag aacattccac agtgcatgac acctgagcag ctgatgacac tgtgcagaga
     1801 aggcattcat agtagtagca tcggggttag agtgaatgtg gtcagtattt tggggatcac
     1861 tggcagtgtc ctagccaaag aagatggcac acttgaaact ctgaagacca ttgggtgctt
     1921 tctgctggaa gtcaccacca aagacccttc cctcgtggta gcaggagagg ctttggatgc
     1981 cctctttgat gtttttgcag atggtgaaga agctgaaaag gcttcagttc aaattaaatt
     2041 gttagcagct ttgaaagaat tccagccagt cttcaaaatg aagatgcgga aagaagggag
     2101 ggccagatac agcccggatc agctgtgtgt tctcgacaat gtgaagatga atctgaggcg
     2161 ctttattgct taccaggaaa ctgttgagaa aagactgact tcttaaaccg tcaagaggac
     2221 cagagctggg gctgcctctg tagctgcatg cctcgctggt atgaacagtc ctgggtctgt
     2281 gcctacctct tgagaaaaaa agaagaggag aaactacttc tcctttccct tgaacgtatg
     2341 tgcttccaaa cgccttcttt tcttttttct tttctttttt cttttctttt tgagacaggt
     2401 tctctctagg tagcccctcg tggcctggag ctcacagagg tctacctgtc tcagtttcct
     2461 gattgctggg attttaggta ttcaacacca cccctgtcct ctgaaagcct tttttctttc
     2521 ttttcttttt ctccttaaga tttatttatt ttttatgagt acattgctgc tgtcttcaga
     2581 cacaccagaa gagggcaatg gacctcatta cagatggttg tgagccacca tgtggttgct
     2641 gggaattgaa ctcaggacct ctgggagagc agtcagtgct cttaactgct gagccatctc
     2701 tccagcctcc aaaagccatt tttcagtact tcattctgga tgttagtttg gatgcaagaa
     2761 cctgtaggaa atgtgtgtta catctccagc atattttagc cactgacaat gtgtcacaat
     2821 ctgaggtgct ggggtggcac tcagggcctt gctcctgctc ggtgagcact ctaccactaa
     2881 ccacacccct gaccctcagt gtggctctta acttaagggc agtaaagaga cttcagacaa
     2941 ttatggctga gttttttgag aaaagaaatt aagtcattgt ttggattgat ttttaaagcc
     3001 aatatcattt tgtattagct aactcctaac tgagatatca agataagctt tataaaatat
     3061 tttgttatgg aatactatgt accaattatg aatcttttgt gaagtaaatg aatttgtcat
     3121 tgtgtggata atggggtgat tgtattctgc atggggtgtc tgagcagttg tgtaacatca
     3181 ttccctgtct taatttgata aggaattaga gagtggtaga aaatgctgct atggtggtgc
     3241 acacctttca tcccagacct tcagaggcag aggcaggagg atctcttgag ttcaaggcca
     3301 acctggccta cagatggagt accaggacag ccgagagacc ctgtctcaaa aaaaaaataa
     3361 gaattagtag aaaatatttt tgaataaata acctttaact gga
//
