LOCUS       NM_001107528            1582 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus HD domain containing 3 (Hddc3), mRNA.
ACCESSION   NM_001107528 XM_001061439 XM_218817
VERSION     NM_001107528.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1582)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473980.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001061439.1, XM_218817.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM115093.1, FM090326.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132262, SAMD00132263
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1582
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q31"
     gene            1..1582
                     /gene="Hddc3"
                     /gene_synonym="RGD1311839"
                     /note="HD domain containing 3"
                     /db_xref="GeneID:308758"
                     /db_xref="RGD:1311839"
     exon            1..131
                     /gene="Hddc3"
                     /gene_synonym="RGD1311839"
                     /inference="alignment:Splign:2.1.0"
     CDS             20..559
                     /gene="Hddc3"
                     /gene_synonym="RGD1311839"
                     /EC_number="3.1.7.2"
                     /note="HD domain-containing protein 3"
                     /codon_start=1
                     /product="guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase MESH1"
                     /protein_id="NP_001100998.1"
                     /db_xref="GeneID:308758"
                     /db_xref="RGD:1311839"
                     /translation="MGSEAAQLLEAADFAAQKHRQQRRKDPEGTPYINHPIGVARILT
                     HEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKR
                     QQVEQAPHSSPGAKLVKLADKLHNLRDLNRCTPKGWSEHRVQEYFEWAAQVVKGLQGT
                     NQQLEEALKQLFEERGLTL"
     exon            132..187
                     /gene="Hddc3"
                     /gene_synonym="RGD1311839"
                     /inference="alignment:Splign:2.1.0"
     exon            188..428
                     /gene="Hddc3"
                     /gene_synonym="RGD1311839"
                     /inference="alignment:Splign:2.1.0"
     exon            429..1582
                     /gene="Hddc3"
                     /gene_synonym="RGD1311839"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccccgcgcc acccgcgcga tgggatcgga ggcagctcag ctgctggagg ctgctgactt
       61 cgccgctcaa aaacaccgac agcagcgacg gaaagatcct gaagggactc cctacatcaa
      121 tcaccccatc ggtgtagccc ggatcctaac ccatgaggct ggaatcactg atattgtggt
      181 gttgcaggcg gccttgctcc atgacacagt agaagacaca gatactaccc tggatgaggt
      241 agagctgcac tttggagcac aggttcgacg cttggtggag gaggtaacag atgacaagac
      301 tctgcccaaa ctggaaagaa agcggcaaca ggtggaacag gcaccccaca gcagcccagg
      361 ggccaaacta gtgaagctgg cagacaagct acacaatcta agggacctga atcgctgcac
      421 ccctaaaggc tggtcagaac atcgagtcca ggagtacttc gagtgggcag cacaggtggt
      481 aaaagggctt caaggaacga accagcaact ggaagaggca ctaaaacagc tgttcgagga
      541 acgagggctg actctctgag agagcctcca tgcagtcctg tggcatggct ccagtaaggc
      601 ccaggaaaga taggattctt actgcatctc caagtgtcct catctctcac attcctttat
      661 tcagcccaga caccacgggc taaaaacttc tgcctttttt cacacagctg agccccggat
      721 atggaaacca gaaatgccca tcatacacta acagcctttc cttaagtctt ggctctgttt
      781 gctgttttgc atggtgggac ctctggcccc ttagggacct aagactggat aagccttggt
      841 ttataagtcg tggaaaataa agcatttagg gtaaaggctt aaactgctgt tcctccttct
      901 ctggtctccc cgaagaggac ccacatgctg gatactcatt tcctatgtgt cttttgcatc
      961 agctcccctg ggttgaaagc atcgaccctt ggagcatggc gtccttatca actgagctgg
     1021 actatgtctt tacgaaggtc agatgatgta gttgtgggat ggcagatata ctgggaagga
     1081 atgccatcac tttttggcaa ctggctggga aggacagaaa tcccagtaac atgagaaggc
     1141 tagaagacct cagtgcccca acaccaactg cagcagttga ttagtggcca atgccttgac
     1201 ccttaaattt tattggcttc ctgggttgct aagtcactag cgcttccaag taaccggaag
     1261 aggccctgaa gtcgccccgc ccatagaggt gggtggaatc tgtagaaaga aaaaagctgt
     1321 ggaggtttga gtttgtgtgc ggaagtccca cagtgtgggt gtggcaatca gagagcttgt
     1381 ggggagttgg atttcgccct ccatcatgta ggtatgggat atcaaacata ggtttgtcag
     1441 gcttggcgag ctgatgcctt tacccactca gctatctcgc cttcgttgcc tcttttgttg
     1501 ttccgttttt gtttgttgga gggggatagg gcccccacag cctttctata attctcctgc
     1561 ctctgcgaca aagcgcaacc at
//
