LOCUS       NM_001408727             883 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus hemoglobin subunit theta 1B (Hbq1b), mRNA.
ACCESSION   NM_001408727 XM_002727758
VERSION     NM_001408727.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 883)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Jun 22, 2022 this sequence version replaced XM_002727758.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ226769.1, FQ233786.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760494, SAMN06621351
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-145               JAXUCZ010000010.1  15839695-15839839   c
            146-350             JAXUCZ010000010.1  15839393-15839597   c
            351-883             JAXUCZ010000010.1  15838752-15839284   c
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..883
                     /gene="Hbq1b"
                     /gene_synonym="Glnd1"
                     /note="hemoglobin subunit theta 1B"
                     /db_xref="GeneID:100361053"
                     /db_xref="RGD:2320907"
     exon            1..145
                     /gene="Hbq1b"
                     /gene_synonym="Glnd1"
                     /inference="alignment:Splign:2.1.0"
     CDS             51..479
                     /gene="Hbq1b"
                     /gene_synonym="Glnd1"
                     /note="globin d1; hemoglobin subunit theta-1-like;
                     hemoglobin, theta 1B; mCG1039741-like"
                     /codon_start=1
                     /product="hemoglobin subunit theta 1B"
                     /protein_id="NP_001395656.1"
                     /db_xref="GeneID:100361053"
                     /db_xref="RGD:2320907"
                     /translation="MALSQTDHRLVLALWKKMGSNVGIYTTEALERTFLAFPSTKTYF
                     PHLDLKPGSSQVKAHAQKVADALTLAAHHLDDLPGSLSALSDLHAHELRVDPANFQFF
                     SHCLLVTLARHYPGDFSPEMHASLDKFLGHVTSALVSKDR"
     exon            146..350
                     /gene="Hbq1b"
                     /gene_synonym="Glnd1"
                     /inference="alignment:Splign:2.1.0"
     exon            351..883
                     /gene="Hbq1b"
                     /gene_synonym="Glnd1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cacagagggc gaagccaggg cacggagcgc acagccacag ttcagtgaag atggctctgt
       61 cccaaactga tcacaggttg gtcctcgcgc tctggaagaa gatgggtagc aatgttggaa
      121 tctacacgac cgaggccttg gagaggactt tcctggcttt cccatccacc aaaacctact
      181 tcccacactt ggacctgaaa ccaggttcca gccaggttaa agcccatgcc caaaaggtgg
      241 ccgatgcact gacactcgct gcccaccacc tggacgacct gcctggttct ctgtctgctc
      301 tcagtgacct acacgcacac gagctccgcg tggaccctgc taactttcag ttctttagcc
      361 actgtctgct ggtgactctt gcccggcact atcccggaga cttcagcccg gagatgcatg
      421 cctccttgga caagtttctg ggtcacgtga cttcggcact ggtctccaag gatcgctgaa
      481 ctgaggatac acagcggtgt agtctttgcc cctgcccttc ttcgaattca caatatttga
      541 gtaaacctcc ccgggactgc attgctgtct tgtatgcaga gttgcacagg agaaagatac
      601 cccacacgca gtatcaaaca aaaggttcca agagactgga attacagcta aactagtgtg
      661 gaaaacctca taggaaagtc agcttccctt gtttttgttg ttttaattca tttttgcctt
      721 tgagatacat tttatgctct atgtaatcca ggctggcctc tcaaatccat cgtacaaact
      781 aggttggtct tgaactcctc acacttgtgt tcccaccctc atctctgtcc atcccccaat
      841 ccccaccaag catgacggat tataaggcat gccccaccat aaa
//
