LOCUS       NM_172093                621 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus hemoglobin subunit gamma 1 (Hbg1), mRNA.
ACCESSION   NM_172093
VERSION     NM_172093.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 621)
  AUTHORS   Hu,X., Eszterhas,S., Pallazzi,N., Bouhassira,E.E., Fields,J.,
            Tanabe,O., Gerber,S.A., Bulger,M., Engel,J.D., Groudine,M. and
            Fiering,S.
  TITLE     Transcriptional interference among the murine beta-like globin
            genes
  JOURNAL   Blood 109 (5), 2210-2216 (2007)
   PUBMED   17077320
REFERENCE   2  (bases 1 to 621)
  AUTHORS   Satoh,H., Inokuchi,N., Nagae,Y. and Okazaki,T.
  TITLE     Molecular cloning and characterization of two sets of alpha-theta
            genes in the rat alpha-like globin gene cluster
  JOURNAL   Gene 230 (1), 91-99 (1999)
   PUBMED   10196478
REFERENCE   3  (bases 1 to 621)
  AUTHORS   Iwahara,S.I., Abe,Y. and Okazaki,T.
  TITLE     Identification of five embryonic hemoglobins of rat and ontogeny of
            their constituent globins during fetal development
  JOURNAL   J Biochem 119 (2), 360-366 (1996)
   PUBMED   8882731
REFERENCE   4  (bases 1 to 621)
  AUTHORS   Pirastu,M., Galanello,R., Doherty,M.A., Tuveri,T., Cao,A. and
            Kan,Y.W.
  TITLE     The same beta-globin gene mutation is present on nine different
            beta-thalassemia chromosomes in a Sardinian population
  JOURNAL   Proc Natl Acad Sci U S A 84 (9), 2882-2885 (1987)
   PUBMED   3033668
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Oct 7, 2022 this sequence version replaced NM_172093.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ228385.1, FQ221361.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06680416, SAMN06680425
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-147               JAXUCZ010000001.1  167685169-167685315 c
            148-370             JAXUCZ010000001.1  167684816-167685038 c
            371-621             JAXUCZ010000001.1  167683760-167684010 c
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..621
                     /gene="Hbg1"
                     /gene_synonym="Glnb2; Hbb-y; Hbe1"
                     /note="hemoglobin subunit gamma 1"
                     /db_xref="GeneID:94164"
                     /db_xref="RGD:620306"
     exon            1..147
                     /gene="Hbg1"
                     /gene_synonym="Glnb2; Hbb-y; Hbe1"
                     /inference="alignment:Splign:2.1.0"
     CDS             56..499
                     /gene="Hbg1"
                     /gene_synonym="Glnb2; Hbb-y; Hbe1"
                     /note="hemoglobin, epsilon 1; hemoglobin Y, beta-like
                     embryonic chain; epsilon 3 globin; hemoglobin, gamma A;
                     globin b2"
                     /codon_start=1
                     /product="hemoglobin subunit gamma 1"
                     /protein_id="NP_742090.1"
                     /db_xref="GeneID:94164"
                     /db_xref="RGD:620306"
                     /translation="MVHFTAEEKAAIISIWEKVDLEKIGGETLGRLLIVYPWTQRFFD
                     KFGNLSSALAIMGNPRIRAHGKKVLTSLGSAVENMDNLKETFAHLSELHCDKLHVDPQ
                     NFKLLGNMLVIVLSTHFAKEFTPEVQAAWQKLVMGVANALSHKYH"
     exon            148..370
                     /gene="Hbg1"
                     /gene_synonym="Glnb2; Hbb-y; Hbe1"
                     /inference="alignment:Splign:2.1.0"
     exon            371..621
                     /gene="Hbg1"
                     /gene_synonym="Glnb2; Hbb-y; Hbe1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacacacttg cttctgcaca cctgagatca tctccaagct tctagacctc acaccatggt
       61 tcacttcaca gctgaggaga aggctgctat cataagcata tgggaaaaag tggacttgga
      121 aaaaattgga ggagaaaccc tgggaaggct cctgattgtt tacccatgga ctcagagatt
      181 ctttgacaaa tttggaaacc tctcttctgc tctggccatc atgggtaacc cccggatcag
      241 agcccatggc aagaaagtgc tgacgtctct aggttcggca gttgagaaca tggacaacct
      301 caaggagacc tttgctcatc tgagtgagct acactgtgac aagcttcatg tggatcctca
      361 gaacttcaag ctcctgggca acatgttggt gattgtcctt tctactcatt ttgccaagga
      421 attcacccca gaggtgcagg ctgcctggca gaagctggtg atgggtgtgg ccaatgctct
      481 gtcccacaag taccattaaa tttccattcc agtagaccag caatccattc tgtctcttat
      541 actccctttg agcccatggg gactggattg ggcattgaga gcacaaattt tgtttaataa
      601 aattaatttt aaataattta a
//
