LOCUS       XM_006246064            1464 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hydroxyacylglutathione hydrolase-like
            (Haghl), transcript variant X1, mRNA.
ACCESSION   XM_006246064
VERSION     XM_006246064.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006246064.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006246064.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1464
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1464
                     /gene="Haghl"
                     /note="hydroxyacylglutathione hydrolase-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 10 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:302995"
                     /db_xref="RGD:1308042"
     CDS             337..1269
                     /gene="Haghl"
                     /codon_start=1
                     /product="hydroxyacylglutathione hydrolase-like protein
                     isoform X1"
                     /protein_id="XP_006246126.1"
                     /db_xref="GeneID:302995"
                     /db_xref="RGD:1308042"
                     /translation="MKVKVIPVLEDNYMYLIIEEHTREAVAVDVAVPKRLLEIAGREG
                     VSLTTVLSTHHHWDHTRGNAELARLQPGLAIMGADERICALTRRLEHGEELQFGAIHV
                     RCLLTPGHTSGHMSYFLWEDECPDPPALFSGTLQPGLTYQPNSTVSSRPPSDPLCSLG
                     DALSVAGCGWHLEDTAQQMYQSLAKTLGTLPPQTKVFCGHEHTLSNLEFAQKVEPCNS
                     HVQAKLSWAQKRDDDDVPTVPSTLGEELMYNPFLRVTEDPVRAFTGQVAPAQVLEVLC
                     RERARFQLASEPPQPQVRALLALQWGLLSTGQEK"
ORIGIN      
        1 tggattggct gctggctgga ctgtctgtcc ctggcaggca ccagttccgt gcatttccag
       61 ctctagcacc cgactttcca gtcgaagaac ctgcagagat taagggtgac ctgggttcct
      121 gccaccgtcc atcaggtctc tgcatcactc acccaggatc tcgactgagg agtggtgatg
      181 ttgcggtggg cagcggccac actctctcca ggactagatc ggcggctcat gtgcgagtga
      241 acgaggtcga cccagtgtgt gtggctgacc cgcccggtgc aactcagaag ggattcctta
      301 ggttgaggaa ctgcggactg gctgaggtct gcgaccatga aggtcaaagt catcccggta
      361 cttgaagaca actacatgta cctgatcatt gaggaacaca cacgggaggc cgtggctgta
      421 gacgtggctg tgcccaagag gctgctggag attgctggcc gcgagggagt gtctctgacc
      481 acggtgctgt ccacccatca tcactgggac catacacgtg gaaatgcgga gctggcgcgc
      541 ctgcagccag gactggctat catgggagca gatgagcgga tctgcgcgct aacccgcagg
      601 ctggaacacg gagaggaact tcagtttggg gccatccacg tgcgatgcct cttgacgccg
      661 ggccacacct ctggccacat gagctacttc ctgtgggagg atgaatgccc ggacccacca
      721 gccctcttct ctggtacctt gcagcctgga ctcacctacc aacccaattc cactgtgtcc
      781 tcccgacccc cttctgaccc tctttgctcc ctaggagatg ctctgtcagt ggcaggctgt
      841 ggctggcacc tggaggacac tgcccagcag atgtaccaga gcttggccaa gactctgggt
      901 acccttccac cccagacgaa ggtgttctgt ggtcatgagc atacgctgag caatcttgag
      961 tttgcacaga aagtggagcc ctgcaacagc cacgtgcaag ctaagctgtc ctgggcccag
     1021 aagagggatg atgatgatgt acctactgtg ccttcaacgc tgggcgagga gctcatgtac
     1081 aaccctttcc taagggtgac agaggatcca gtccgtgcgt tcacaggcca ggtggcacca
     1141 gcccaggtcc tggaggtgct ctgcagggag cgagcacgct tccagcttgc ttcggagcct
     1201 ccacagcccc aggtccgggc actcctggcc ttacaatggg ggcttctgag cacaggccag
     1261 gaaaagtgaa ctgtgtgggg agcctgcttg tctccacact cctctgaacc tcaggccgac
     1321 tggaaccctg ccaccctgac tgcttatgga gccatacaag tgtggtctgt aggagctctt
     1381 gtgggtccag agacatacat cctggggact gaggagggta aataaaactt tgaaaggcgc
     1441 agtgtggtac cacagacaca cagc
//
