LOCUS       XM_039085187             960 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hydroxyacyl glutathione hydrolase
            (Hagh), transcript variant X3, mRNA.
ACCESSION   XM_039085187
VERSION     XM_039085187.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..960
                     /gene="Hagh"
                     /gene_synonym="Glo2; RSP29"
                     /note="hydroxyacyl glutathione hydrolase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 ESTs, 2 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     49 samples with support for all annotated introns"
                     /db_xref="GeneID:24439"
                     /db_xref="RGD:2779"
     CDS             84..791
                     /gene="Hagh"
                     /gene_synonym="Glo2; RSP29"
                     /codon_start=1
                     /product="hydroxyacylglutathione hydrolase, mitochondrial
                     isoform X2"
                     /protein_id="XP_038941115.1"
                     /db_xref="GeneID:24439"
                     /db_xref="RGD:2779"
                     /translation="MVLGRGSLCLRSLSVLGAACARRGLGQALLGLSLCHTDFRKNLT
                     VQQDMMKIELLPALTDNYMYLIIDEDTQEAAVVDPVQPQKVIETVKKHRVKLTTVLTT
                     HHHWDHAGGNEKLVKLEPGLKVYGGDDRIGALTHKVTHLSTLQVGSLSVKCLSTPCHT
                     SGHICYFVSKPGSSEPSAVFTGEECHRGAHGAIHPGRGVHLQPLHESEGEDRAAARWR
                     DRPCDHHEGHPQGERPV"
ORIGIN      
        1 tggttgcagt cgccaacgcc agtgttgatg cccacgacgc tggtgttgcg gactccgcga
       61 cccggctgtg caccccgtgg gtcatggtgc tgggtcgcgg gtcgctgtgc ctccggagcc
      121 tgtcagtgct gggagccgcc tgcgcgcgcc gcggtctggg tcaggctctg ctgggactct
      181 ctctctgtca cacagacttc aggaagaatc tgaccgtgca gcaagacatg atgaagatcg
      241 aactactgcc tgccctgact gacaactaca tgtacctgat cattgatgag gacacccagg
      301 aggccgccgt tgtggaccca gtgcagccac agaaggttat agaaactgtg aaaaagcacc
      361 gtgtgaagct gaccacagtg ctcaccactc accaccactg ggaccacgct ggtgggaacg
      421 agaagttggt gaagctggaa cctgggctga aggtttatgg aggtgatgac cgcattgggg
      481 ccttgaccca caaggtcaca cacctttcca cactgcaggt ggggtctctc agtgtcaaat
      541 gtctgtcaac accctgccat acttcagggc acatctgtta ctttgtgagc aagcctggta
      601 gctcagagcc ttctgctgtg ttcacaggag aagaatgcca tcggggagcc cacggtgcca
      661 tccaccctgg cagaggagtt cacttacaac cccttcatga gagtgaagga gaagaccgtg
      721 cagcagcacg ctggagagac cgaccctgtg accaccatga gggccatccg cagggagaaa
      781 gaccagttta aggtgcctcg ggactgagga acacggggac agggactttt aactgactgt
      841 cctgctgcta aagcaggacc tagtctaatt ttaagttaat tcaaagccct tagcttgtgt
      901 tgtcaaatgt tctaatgcat atttataaga gaaaaaggtt taaagtattt attcccataa
//
