LOCUS       NM_001109642             561 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus H3.4 histone, cluster member (H3f4), mRNA.
ACCESSION   NM_001109642 XM_001078541
VERSION     NM_001109642.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Maehara,K., Harada,A., Sato,Y., Matsumoto,M., Nakayama,K.I.,
            Kimura,H. and Ohkawa,Y.
  TITLE     Tissue-specific expression of histone H3 variants diversified after
            species separation
  JOURNAL   Epigenetics Chromatin 8, 35 (2015)
   PUBMED   26388943
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 561)
  AUTHORS   Kato,D., Osakabe,A., Tachiwana,H., Tanaka,H. and Kurumizaka,H.
  TITLE     Human tNASP promotes in vitro nucleosome assembly with histone H3.3
  JOURNAL   Biochemistry 54 (5), 1171-1179 (2015)
   PUBMED   25615412
REFERENCE   3  (bases 1 to 561)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
REFERENCE   4  (bases 1 to 561)
  AUTHORS   Buschow,S.I., van Balkom,B.W., Aalberts,M., Heck,A.J., Wauben,M.
            and Stoorvogel,W.
  TITLE     MHC class II-associated proteins in B-cell exosomes and potential
            functional implications for exosome biogenesis
  JOURNAL   Immunol Cell Biol 88 (8), 851-856 (2010)
   PUBMED   20458337
REFERENCE   5  (bases 1 to 561)
  AUTHORS   Tachiwana,H., Kagawa,W., Osakabe,A., Kawaguchi,K., Shiga,T.,
            Hayashi-Takanaka,Y., Kimura,H. and Kurumizaka,H.
  TITLE     Structural basis of instability of the nucleosome containing a
            testis-specific histone variant, human H3T
  JOURNAL   Proc Natl Acad Sci U S A 107 (23), 10454-10459 (2010)
   PUBMED   20498094
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Nov 3, 2022 this sequence version replaced NM_001109642.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: CK469582.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-561               JAXUCZ010000010.1  44240282-44240842
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..561
                     /gene="H3f4"
                     /gene_synonym="Hist3h3"
                     /note="H3.4 histone, cluster member"
                     /db_xref="GeneID:691496"
                     /db_xref="RGD:1583877"
     exon            1..561
                     /gene="H3f4"
                     /gene_synonym="Hist3h3"
                     /inference="alignment:Splign:2.1.0"
     CDS             96..506
                     /gene="H3f4"
                     /gene_synonym="Hist3h3"
                     /note="histone cluster 3, H3"
                     /codon_start=1
                     /product="H3.4 histone"
                     /protein_id="NP_001103112.1"
                     /db_xref="GeneID:691496"
                     /db_xref="RGD:1583877"
                     /translation="MARTKQTARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYHP
                     GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACESYLV
                     GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
ORIGIN      
        1 ggcgggcaac caataggaat gcagctgggt ctataaaagc tgcggtgctc gccaccctct
       61 gcacctgagg agaggaggga atacggccca ggaagatggc acgcaccaag cagacagcac
      121 ggaagtcgac gggaggcaag gctccacgca agcagctagc cacgaaggtg gcacgcaaga
      181 gcgctccagc caccggcggc gtgaagaagc cgcaccgcta ccaccctggt actgtggcat
      241 tgcgagagat ccggcgctac cagaaatcca ccgagctgtt gatccgcaag ctaccgttcc
      301 agcgcttggt ccgtgaaatc gcccaggact tcaagaccga cttgcgcttc cagagctcgg
      361 ctgtaatggc gctgcaggag gcctgcgagt cgtacctcgt ggggctcttc gaggacacga
      421 acctgtgcgc tatccatgcc aagcgggtta ccatcatgcc caaagacatc cagttggctc
      481 ggcgcatacg cggagaacgg gcttagacct ccacaggcac tgctcatcaa ccaacccaac
      541 ggctcttttc agagccaccc a
//
